Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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SsDNA mapping in dmc1 strains


ABSTRACT: ssDNA enrichment was used to map and compare DSB hotspots in dmc1, pch2 dmc1, sir2 dmc1, orc1-161 dmc1, dmc1 rdnadelete and dmc1 chr2:12 translocation strains. 6 samples, 2 replicates each. Averaged data is available as a supplementary file on the Series record (below).

ORGANISM(S): Saccharomyces cerevisiae

SUBMITTER: Andreas Hochwagen 

PROVIDER: E-GEOD-30071 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Protection of repetitive DNA borders from self-induced meiotic instability.

Vader Gerben G   Blitzblau Hannah G HG   Tame Mihoko A MA   Falk Jill E JE   Curtin Lisa L   Hochwagen Andreas A  

Nature 20110807 7362


DNA double strand breaks (DSBs) in repetitive sequences are a potent source of genomic instability, owing to the possibility of non-allelic homologous recombination (NAHR). Repetitive sequences are especially at risk during meiosis, when numerous programmed DSBs are introduced into the genome to initiate meiotic recombination. In the repetitive ribosomal DNA (rDNA) array of the budding yeast Saccharomyces cerevisiae, meiotic DSB formation is prevented in part through Sir2-dependent heterochromat  ...[more]

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