Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

Platypus fibroblast and ovary transcriptomes

ABSTRACT: As a result of sex chromosome differentiation from ancestral autosomes, male mammalian cells only contain one X chromosome. It has long been hypothesized that X-linked gene expression levels have become doubled in males to restore dosage balance between the X and autosomes, and that the resulting X overexpression in females then drove the evolution of X inactivation (XCI). However, this model has never been directly tested and patterns and mechanisms of dosage compensation across different mammals and birds generally remain little understood. We have traced the evolution of dosage compensation using extensive transcriptome data from males and females representing all major mammalian lineages and birds. Our analyses suggest that the X has become globally upregulated in marsupials but probably not in placental mammals, where instead at least a subset of autosomal genes interacting with X-linked were downregulated. Thus, different driving forces may underlie the evolution of XCI and the highly efficient equilibration of X expression levels between the sexes observed for both of these lineages. In the egg-laying monotremes and birds, which have homologous sex chromosome systems, partial upregulation of the X (Z in birds) evolved but is largely restricted to the heterogametic sex, which provides an explanation for the partially sex-biased X (Z) expression and lack of global inactivation mechanisms in these lineages. Our findings suggest that dosage reductions imposed by sex chromosome differentiation events in amniotes were resolved in strikingly different ways. 3 samples (ovary, fibroblast male, fibroblast female) from different platypus individuals are analysed.

ORGANISM(S): Ornithorhynchus anatinus

SUBMITTER: Philippe Julien

PROVIDER: E-GEOD-36120 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Mechanisms and evolutionary patterns of mammalian and avian dosage compensation.

Julien Philippe P Brawand David D Soumillon Magali M Necsulea Anamaria A Liechti Angélica A Schütz Frédéric F Daish Tasman T Grützner Frank F Kaessmann Henrik H

PLoS biology 20120515 5

As a result of sex chromosome differentiation from ancestral autosomes, male mammalian cells only contain one X chromosome. It has long been hypothesized that X-linked gene expression levels have become doubled in males to restore the original transcriptional output, and that the resulting X overexpression in females then drove the evolution of X inactivation (XCI). However, this model has never been directly tested and patterns and mechanisms of dosage compensation across different mammals and ...[more]

PMID: 22615540

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Dataset Information

Platypus fibroblast and ovary transcriptomes

Publications

Mechanisms and evolutionary patterns of mammalian and avian dosage compensation.

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