Expression analysis of Yarrowia lipolytica Y4184 snf1 mutant

ABSTRACT: Investigation of whole genome gene expression level changes in a Yarrowia lipolytica Y4184 snf1 mutant, compared to the Y4184U+. The Y4184 is an engineered strain to produce eicosapentaenoic acid (EPA) via expression of a M-NM-^T9 elongase/M-NM-^T8 desaturase pathway, and is derived from Yarrowia lipolytica ATCC#20362. A six chip study using total RNA recovered from three separate cultures of Yarrowia lipolytica Y4184Ura+ strains and three separate cultures of Y4184 snf1 mutant strains in which YlSNF1 gene is deleted entirely. Each chip measures the expression level of 6708 genes from Yarrowia lipolytica ATCC#20362 with fourteen 24-mer probe pairs (PM/MM) per gene, with three-fold technical redundancy.

ORGANISM(S): Yarrowia lipolytica

SUBMITTER: Seung-Pyo Hong 

PROVIDER: E-GEOD-45611 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress