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Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Microarray analysis of Caenorhabditis elegans exposed to four indirect-acting toxicants

ABSTRACT: In this study, we exposed Caenorhabditis elegans wild types N2 to the model indirect-acting toxicants aflatoxin B1 (AFB1), benzo(a)pyrene (B(a)P), the PCB mixture Aroclor 1254 (PCB1254), and 2,3,7,8-tetrachlorodibenzodioxin (TCDD). In microarray experiments, we studied one concentration of AFB1 (30 μM), one concentration of B(a)P (30 μM), two concentrations of PCB1254 (1 μM and 30 μM), and two concentrations of TCDD (1 μM and 10 μM). As a control M9 medium with 0.5% DMSO was used. Age synchronized worms at developmental L4 larval stage were exposed to treatment for 24 hours. After flash freezing the samples, RNA was isolated, labeled and hybridized on oligo microarray (Agilent) slides.

ORGANISM(S): Caenorhabditis elegans

SUBMITTER: Inez Dinkla

PROVIDER: E-MTAB-11143 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Differential expression of genes in C. elegans reveals transcriptional responses to indirect-acting xenobiotic compounds and insensitivity to 2,3,7,8-tetrachlorodibenzodioxin.

Karengera Antoine A Sterken Mark G MG Kammenga Jan E JE Riksen Joost A G JAG Dinkla Inez J T IJT Murk Albertinka J AJ

Ecotoxicology and environmental safety 20220223

Caenorhabditis elegans is a well-established model organism for toxicity testing of chemical substances. We recently demonstrated its potential for bioanalysis of the toxic potency of chemical contaminants in water. While many detoxification genes are homologues to those in mammalians, C. elegans is reported to be deficient in cytochrome CYP1-like P450 metabolism and that its aryl hydrocarbon receptor (AhR) homolog encoded by ahr-1 purportedly does not interact with dioxins or any other known xe ...[more]

PMID: 35219257

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