Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Molecular pathology of Usher 1B patient-derived retinal organoids at single cell resolution

ABSTRACT: Compare single cell transcriptomes of control and USH1B patient iPSC-derived retinal organoids to elucidate disease mechanisms of Usher syndrome type IB (USH1B). USH1B patient fibroblasts were collected at Great Ormond Street Hospital (GOSH) and reprogrammed to iPSCs. Control and patient iPSCs differentiated in vitro to generate retinal organoids and collected at 35wks. Sequencing was performed at GENEWIZ (Azenta life sciences) on a Illumina NovaSeq system. Data aligned to the human genome UCSC hg38 using cellranger package.

INSTRUMENT(S): Illumina NovaSeq 6000

ORGANISM(S): Homo sapiens

SUBMITTER: Jane Sowden

PROVIDER: E-MTAB-11990 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Molecular pathology of Usher 1B patient-derived retinal organoids at single cell resolution

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