Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Single cell derived clonal analysis of human glioblastoma links functional and genomic heterogeneity


ABSTRACT: Single cell derived clones were extracted from four glioblastoma tumors using fluorescence activated cell sorting with CD15 and CD133 markers. Unsorted bulk tumors were also derived. Gene expression analysis of clones of tumor GBM-482 involved comparison between TMZ resistant (n=5) and sensitive (n=2) clones.

ORGANISM(S): Homo sapiens

SUBMITTER: Juri Reimand 

PROVIDER: E-MTAB-2693 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Single cell-derived clonal analysis of human glioblastoma links functional and genomic heterogeneity.

Meyer Mona M   Reimand Jüri J   Lan Xiaoyang X   Head Renee R   Zhu Xueming X   Kushida Michelle M   Bayani Jane J   Pressey Jessica C JC   Lionel Anath C AC   Clarke Ian D ID   Cusimano Michael M   Squire Jeremy A JA   Scherer Stephen W SW   Bernstein Mark M   Woodin Melanie A MA   Bader Gary D GD   Dirks Peter B PB  

Proceedings of the National Academy of Sciences of the United States of America 20150105 3


Glioblastoma (GBM) is a cancer comprised of morphologically, genetically, and phenotypically diverse cells. However, an understanding of the functional significance of intratumoral heterogeneity is lacking. We devised a method to isolate and functionally profile tumorigenic clones from patient glioblastoma samples. Individual clones demonstrated unique proliferation and differentiation abilities. Importantly, naïve patient tumors included clones that were temozolomide resistant, indicating that  ...[more]

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