Unknown

Dataset Information

0

Genetic subgroups inform on pathobiology in adult and pediatric Burkitt lymphoma.


ABSTRACT: Burkitt lymphoma (BL) accounts for most pediatric non-Hodgkin lymphomas, being less common but significantly more lethal when diagnosed in adults. Much of the knowledge of the genetics of BL thus far has originated from the study of pediatric BL (pBL), leaving its relationship to adult BL (aBL) and other adult lymphomas not fully explored. We sought to more thoroughly identify the somatic changes that underlie lymphomagenesis in aBL and any molecular features that associate with clinical disparities within and between pBL and aBL. Through comprehensive whole-genome sequencing of 230 BL and 295 diffuse large B-cell lymphoma (DLBCL) tumors, we identified additional significantly mutated genes, including more genetic features that associate with tumor Epstein-Barr virus status, and unraveled new distinct subgroupings within BL and DLBCL with 3 predominantly comprising BLs: DGG-BL (DDX3X, GNA13, and GNAI2), IC-BL (ID3 and CCND3), and Q53-BL (quiet TP53). Each BL subgroup is characterized by combinations of common driver and noncoding mutations caused by aberrant somatic hypermutation. The largest subgroups of BL cases, IC-BL and DGG-BL, are further characterized by distinct biological and gene expression differences. IC-BL and DGG-BL and their prototypical genetic features (ID3 and TP53) had significant associations with patient outcomes that were different among aBL and pBL cohorts. These findings highlight shared pathogenesis between aBL and pBL, and establish genetic subtypes within BL that serve to delineate tumors with distinct molecular features, providing a new framework for epidemiologic, diagnostic, and therapeutic strategies.

SUBMITTER: Thomas N 

PROVIDER: S-EPMC10023728 | biostudies-literature | 2023 Feb

REPOSITORIES: biostudies-literature

altmetric image

Publications

Genetic subgroups inform on pathobiology in adult and pediatric Burkitt lymphoma.

Thomas Nicole N   Dreval Kostiantyn K   Gerhard Daniela S DS   Hilton Laura K LK   Abramson Jeremy S JS   Ambinder Richard F RF   Barta Stefan S   Bartlett Nancy L NL   Bethony Jeffrey J   Bhatia Kishor K   Bowen Jay J   Bryan Anthony C AC   Cesarman Ethel E   Casper Corey C   Chadburn Amy A   Cruz Manuela M   Dittmer Dirk P DP   Dyer Maureen A MA   Farinha Pedro P   Gastier-Foster Julie M JM   Gerrie Alina S AS   Grande Bruno M BM   Greiner Timothy T   Griner Nicholas B NB   Gross Thomas G TG   Harris Nancy L NL   Irvin John D JD   Jaffe Elaine S ES   Henry David D   Huppi Rebecca R   Leal Fabio E FE   Lee Michael S MS   Martin Jean Paul JP   Martin Marie-Reine MR   Mbulaiteye Sam M SM   Mitsuyasu Ronald R   Morris Vivian V   Mullighan Charles G CG   Mungall Andrew J AJ   Mungall Karen K   Mutyaba Innocent I   Nokta Mostafa M   Namirembe Constance C   Noy Ariela A   Ogwang Martin D MD   Omoding Abraham A   Orem Jackson J   Ott German G   Petrello Hilary H   Pittaluga Stefania S   Phelan James D JD   Ramos Juan Carlos JC   Ratner Lee L   Reynolds Steven J SJ   Rubinstein Paul G PG   Sissolak Gerhard G   Slack Graham G   Soudi Shaghayegh S   Swerdlow Steven H SH   Traverse-Glehen Alexandra A   Wilson Wyndham H WH   Wong Jasper J   Yarchoan Robert R   ZenKlusen Jean C JC   Marra Marco A MA   Staudt Louis M LM   Scott David W DW   Morin Ryan D RD  

Blood 20230201 8


Burkitt lymphoma (BL) accounts for most pediatric non-Hodgkin lymphomas, being less common but significantly more lethal when diagnosed in adults. Much of the knowledge of the genetics of BL thus far has originated from the study of pediatric BL (pBL), leaving its relationship to adult BL (aBL) and other adult lymphomas not fully explored. We sought to more thoroughly identify the somatic changes that underlie lymphomagenesis in aBL and any molecular features that associate with clinical dispari  ...[more]

Similar Datasets

| S-EPMC7253744 | biostudies-literature
2024-10-24 | GSE240252 | GEO
| S-EPMC3674561 | biostudies-literature
| S-EPMC5649549 | biostudies-literature
| S-EPMC6717587 | biostudies-literature
2013-07-01 | GSE48435 | GEO
| PRJNA1003044 | ENA
2013-07-01 | E-GEOD-48435 | biostudies-arrayexpress
| S-EPMC10506053 | biostudies-literature
| S-EPMC9851706 | biostudies-literature