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Evidence of survival bias in the association between APOE-ϵ4 and age of ischemic stroke onset.


ABSTRACT: Large genome-wide association studies (GWAS) employing case-control study designs have now identified tens of loci associated with ischemic stroke (IS). As a complement to these studies, we performed GWAS in a case-only design to identify loci influencing age at onset (AAO) of ischemic stroke. Analyses were conducted in a Discovery cohort of 10,857 ischemic stroke cases using a linear regression framework. We meta-analyzed all SNPs with p-value < 1×10-5 in a sex-combined or sex-stratified analysis using summary data from two additional replication cohorts. In the women-only meta-analysis, we detected significant evidence for association of AAO with rs429358, an exonic variant in APOE that encodes for the APOE-ϵ4 allele. Each copy of the rs429358:T>C allele was associated with a 1.29 years earlier stroke AOO (meta p-value = 2.48×10-11). This APOE variant has previously been associated with increased mortality and ischemic stroke AAO. We hypothesized that the association with AAO may reflect a survival bias attributable to an age-related decline in mortality among APOE-ϵ4 carriers and have no association to stroke AAO per se. Using a simulation study, we found that a variant associated with overall mortality might indeed be detected with an AAO analysis. A variant with a two-fold increase on mortality risk would lead to an observed effect of AAO that is comparable to what we found. In conclusion, we detected a robust association of the APOE locus with stroke AAO and provided simulations to suggest that this association may be unrelated to ischemic stroke per se but related to a general survival bias.

SUBMITTER: von Berg J 

PROVIDER: S-EPMC10705635 | biostudies-literature | 2023 Dec

REPOSITORIES: biostudies-literature

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Evidence of survival bias in the association between <i>APOE-ϵ4</i> and age of ischemic stroke onset.

von Berg Joanna J   McArdle Patrick F PF   Häppölä Paavo P   Haessler Jeffrey J   Kooperberg Charles C   Lemmens Robin R   Pezzini Alessandro A   Thijs Vincent V   Pulit Sara L SL   Kittner Steven J SJ   Mitchell Braxton D BD   de Ridder Jeroen J   van der Laan Sander W SW  

medRxiv : the preprint server for health sciences 20231201


Large genome-wide association studies (GWAS) employing case-control study designs have now identified tens of loci associated with ischemic stroke (IS). As a complement to these studies, we performed GWAS in a case-only design to identify loci influencing age at onset (AAO) of ischemic stroke. Analyses were conducted in a Discovery cohort of 10,857 ischemic stroke cases using a linear regression framework. We meta-analyzed all SNPs with p-value < 1×10<sup>-5</sup> in a sex-combined or sex-strati  ...[more]

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