Unknown

Dataset Information

0

Transcriptomics identifies blunted immunomodulatory effects of vitamin D in people with multiple sclerosis.


ABSTRACT: Vitamin D deficiency is a risk factor for developing multiple sclerosis (MS). However, the immune effects of vitamin D in people with MS are not well understood. We analyzed transcriptomic datasets generated by RNA sequencing of immune cell subsets (CD4+, CD8+ T cells, B cells, monocytes) from 33 healthy controls and 33 untreated MS cases. We utilized a traditional bioinformatic pipeline and weighted gene co-expression network analysis (WGCNA) to determine genes and pathways correlated with endogenous vitamin D. In controls, CD4+ and CD8+ T cells had 1079 and 1188 genes, respectively, whose expressions were correlated with plasma 25-hydroxyvitamin D level (P < 0.05). Functional enrichment analysis identified association with TNF-alpha and MAPK signaling. In CD4+ T cells of controls, vitamin D level was associated with expression levels of several genes proximal to multiple sclerosis risk loci (P = 0.01). Genes differentially associated with endogenous vitamin D by case-control status were enriched in TNF-alpha signaling via NF-κB. WGCNA suggested a blunted response to vitamin D in cases relative to controls. Collectively, our findings provide further evidence for the immune effects of vitamin D, and demonstrate a differential immune response to vitamin D in cases relative to controls, highlighting a possible mechanism contributing to MS pathophysiology.

SUBMITTER: Yeh WZ 

PROVIDER: S-EPMC10792011 | biostudies-literature | 2024 Jan

REPOSITORIES: biostudies-literature

altmetric image

Publications

Transcriptomics identifies blunted immunomodulatory effects of vitamin D in people with multiple sclerosis.

Yeh Wei Z WZ   Lea Rodney R   Stankovich Jim J   Sampangi Sandeep S   Laverick Louise L   Van der Walt Anneke A   Jokubaitis Vilija V   Gresle Melissa M   Butzkueven Helmut H  

Scientific reports 20240116 1


Vitamin D deficiency is a risk factor for developing multiple sclerosis (MS). However, the immune effects of vitamin D in people with MS are not well understood. We analyzed transcriptomic datasets generated by RNA sequencing of immune cell subsets (CD4<sup>+</sup>, CD8<sup>+</sup> T cells, B cells, monocytes) from 33 healthy controls and 33 untreated MS cases. We utilized a traditional bioinformatic pipeline and weighted gene co-expression network analysis (WGCNA) to determine genes and pathway  ...[more]

Similar Datasets

| EGAS00001007254 | EGA
| S-EPMC7817192 | biostudies-literature
| S-EPMC8491073 | biostudies-literature
| S-EPMC6868771 | biostudies-literature
| S-EPMC7443468 | biostudies-literature
| S-EPMC7289406 | biostudies-literature
| S-EPMC9021186 | biostudies-literature
| S-EPMC5966473 | biostudies-literature
| S-EPMC7284826 | biostudies-literature
| S-EPMC8423880 | biostudies-literature