ProGenExpress: visualization of quantitative data on prokaryotic genomes.

ABSTRACT:

Background

The integration of genomic information with quantitative experimental data is a key component of systems biology. An increasing number of microbial genomes are being sequenced, leading to an increasing amount of data from post-genomics technologies. The genomes of prokaryotes contain many structures of interest, such as operons, pathogenicity islands and prophage sequences, whose behaviour is of interest during infection and disease. There is a need for simple and novel tools to display and analyse data from these integrated datasets, and we have developed ProGenExpress as a tool for visualising arbitrarily complex numerical data in the context of prokaryotic genomes.

Results

Here we describe ProGenExpress, an R package that allows researchers to easily and quickl

SUBMITTER: Watson M 

PROVIDER: S-EPMC1087476 | biostudies-literature | 2005 Apr

REPOSITORIES: biostudies-literature