Dataset Information

A multi-variable predictive warning model for cervical cancer using clinical and SNPs data.

ABSTRACT:

Introduction

Cervical cancer is the fourth most common cancer among female worldwide. Early detection and intervention are essential. This study aims to construct an early predictive warning model for cervical cancer and precancerous lesions utilizing clinical data and simple nucleotide polymorphisms (SNPs).

Methods

Clinical data and germline SNPs were collected from 472 participants. Univariate logistic regression, least absolute shrinkage selection operator (LASSO), and stepwise regression were performed to screen variables. Logistic regression (LR), support vector machine (SVM), random forest (RF), decision tree (DT), extreme gradient boosting(XGBoost) and neural network(NN) were applied to establish models. The receiver operating characteristic (ROC) curve was used to compare the models' efficiencies. The performance of models was validated using decision curve analysis (DCA).

Results

The LR model, which included 6 SNPs and 2 clinical variables as independent risk factors for cervical carcinogenesis, was ultimately chosen as the most optimal model. The DCA showed that the LR model had a good clinical application.

Discussion

The predictive model effectively foresees cervical cancer risk using clinical and SNP data, aiding in planning timely interventions. It provides a transparent tool for refining clinical decisions in cervical cancer management.

SUBMITTER: Li X

PROVIDER: S-EPMC10918689 | biostudies-literature | 2024

REPOSITORIES: biostudies-literature

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Publications

A multi-variable predictive warning model for cervical cancer using clinical and SNPs data.

Li Xiangqin X Ning Ruoqi R Xiao Bing B Meng Silu S Sun Haiying H Fan Xinran X Li Shuang S

Frontiers in medicine 20240222

<h4>Introduction</h4>Cervical cancer is the fourth most common cancer among female worldwide. Early detection and intervention are essential. This study aims to construct an early predictive warning model for cervical cancer and precancerous lesions utilizing clinical data and simple nucleotide polymorphisms (SNPs).<h4>Methods</h4>Clinical data and germline SNPs were collected from 472 participants. Univariate logistic regression, least absolute shrinkage selection operator (LASSO), and stepwise ...[more]

PMID: 38455474

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Dataset Information

A multi-variable predictive warning model for cervical cancer using clinical and SNPs data.

Introduction

Methods

Results

Discussion

Publications

A multi-variable predictive warning model for cervical cancer using clinical and SNPs data.

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