Complete chloroplast genome sequence of the wild diploid potato relative, Solanum brevicaule.

ABSTRACT: Solanum brevicaule is a wild tuber-bearing species belonging to Solanaceae family. The complete chloroplast genome of S. brevicaule was constituted by de novo assembly using a small amount of whole genome sequencing data. The chloroplast genome of S. brevicaule was the circular DNA molecule with a length of 155,531?bp and consisted of 85,981?bp of large single copy, 18,352?bp of small single copy, and 25,599?bp of a pair of inverted repeat regions. A total of 158 genes were annotated including 105 protein-coding genes, 45 tRNA genes and eight rRNA genes. Maximum likelihood phylogenetic analysis with 30 Solanaceae species revealed that S. brevicaule is grouped with other Solanum species including S. tuberosum.

SUBMITTER: Park TH 

PROVIDER: S-EPMC7707683 | biostudies-literature | 2019 Nov

REPOSITORIES: biostudies-literature