Transcriptomics

Dataset Information

0

Molecular profiling of stem cell-derived retinal pigment epithelial cell differentiation established for clinical translation


ABSTRACT: Human embryonic stem cell-derived retinal pigment epithelial cells (hESC-RPE) are a promising cell source to treat age-related macular degeneration (AMD). Despite several ongoing clinical studies, a detailed mapping of transient cellular states during in vitro differentiation has not been performed. Here we conduct single-cell transcriptomic profiling of a hESC-RPE differentiation protocol that has been developed for clinical use. Differentiation progressed through a culture diversification recapitulating early embryonic development, in which cells rapidly acquired a rostral embryo patterning signature, before converging towards the RPE lineage. At intermediate steps, we identified and examined the potency of a NCAM1+ retinal progenitor population and showed the ability of the protocol to suppress non-RPE fates. We demonstrated that the method produces a pure RPE pool capable of maturing further after subretinal transplantation in a large-eyed animal model. Our evaluation of hESC-RPE differentiation supports the development of safe and efficient pluripotent stem cell-based therapies for AMD.

ORGANISM(S): Oryctolagus cuniculus Homo sapiens

PROVIDER: GSE164092 | GEO | 2021/02/04

REPOSITORIES: GEO

Similar Datasets

2015-09-14 | E-MTAB-3878 | biostudies-arrayexpress
2023-05-22 | GSE212896 | GEO
2021-10-20 | GSE180616 | GEO
2016-07-03 | E-MTAB-4154 | biostudies-arrayexpress
2022-01-21 | MSV000088713 | MassIVE
2009-10-23 | E-GEOD-17938 | biostudies-arrayexpress
2023-11-29 | GSE244661 | GEO
2020-02-29 | E-MTAB-7742 | biostudies-arrayexpress
2022-12-28 | GSE190263 | GEO
2018-05-22 | GSE99240 | GEO