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Differential gene expression in a BPs lysogen Mycobacterium chelonae CCUG 47445 compared to wild type

ABSTRACT: The goal of this sequencing project was to identify bacterial genes that are differentially expressed in the presence of the BPs prophage.

ORGANISM(S): Mycobacteroides chelonae

PROVIDER: GSE164210 | GEO | 2021/06/04

REPOSITORIES: GEO

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Differential gene expression in a BPs lysogen Mycobacterium chelonae CCUG 47445 compared to wild type

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Candida Iron deprived Cells: Control vs. BPS treated

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Project description:Purpose: the goal of this study is to determine the changes in gene expression during EB differentiation after BPA, BPF and BPS treatments, as indications of potential developmental toxicity. Methods: Transcriptomics profiling for EB samples treated with 100 nM BPA, BPF, BPS or DMSO control at different time points were generated by RNA-seq, using a BGISEQ-500 platform. Reads were filtered and aligned to the reference genome with Bowtie2. Results: BPA, BPF and BPS disrupted many processes, during mESC global and neural differentiations, in very similar manners. In fact, analogous gene categories were differentially regulated by the three chemicals, at each time point, particularly the ones involved in cell-matrix and cell-cell adhesions, signal transduction pathways, and medical conditions such as cardiovascular diseases and cancer.

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Transcriptomic profile of LadyBird mycobacteriophage lysogen

Project description:The goal of this sequencing project was to identify genes and ncRNAs expressed by the LadyBird prophage

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Alexandraki-S.cerevisiae-WT SC BCS BPS

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2024-04-27 | GSE217951 | GEO

Effects of BPA, BPAF, and BPS on Endochondral Ossification and on the Transcriptome of Ex Vivo Murine Limb Bud Cultures III

Project description:We report the results of treatment of embryonic limbs with bisphenol S. RNA sequencing was performed to measure differential expression as a result of exposure to BPS compared to DMSO treated control limbs.

2023-07-31 | GSE182521 | GEO

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