Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Geobacter sulfurreducens grown in various conditions: gene expression and RpoN ChIP-chip

ABSTRACT: This SuperSeries is composed of the SubSeries listed below.

ORGANISM(S): Geobacter sulfurreducens PCA

PROVIDER: GSE17838 | GEO | 2010/06/28

SECONDARY ACCESSION(S): PRJNA117895

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Geobacter sulfurreducens grown in various conditions: gene expression and RpoN ChIP-chip

Project description:This SuperSeries is composed of the following subset Series: GSE17834: Transcriptome analysis of Geobacter sulfurreducens grown with different nitrogen sources GSE17837: ChIP-chip of Geobacter sulfurreducens PCA with antibody against RpoN under various conditions. Refer to individual Series

2010-06-28 | E-GEOD-17838 | biostudies-arrayexpress

ChIP-chip of Geobacter sulfurreducens PCA with antibody against RpoN under various conditions.

2010-06-30 | GSE17837 | GEO

Analysis of Geobacter sulfurreducens under multiple growth conditions

Project description:This SuperSeries is composed of the SubSeries listed below.

2010-07-01 | GSE22512 | GEO

ChIP-chip of Geobacter sulfurreducens PCA with antibody against RpoN under various conditions.

Project description:We applied a ChIP-chip approach to elucidate the σN regulon experimentally under different growth conditions. This technique localizes DNA fragments within σN complexes enriched by chromatin immunoprecipitation using high-density oligonucleotide tilling arrays. A nine ChIP-chip study using immunoprecipitated DNA (IP-DNA) from three separate culture conditions. The high-density oligonucleotide tiling arrays used were consisted of 381,174 oligonucleotide probes spaced 20 bp apart (30-bp overlap between two probes) across the G.sulfurreducens genome (NimbleGen). Experiments were conducted as three bioliogical replicates (different cultures)

2010-06-30 | E-GEOD-17837 | biostudies-arrayexpress

Geobacter sulfurreducens biofilm transcriptomics

Project description:This SuperSeries is composed of the SubSeries listed below.

2010-11-23 | GSE19158 | GEO

Genome-wide analysis of the RpoN regulon in Geobacter sulfurreducens.

Project description: Not available

| S-EPMC2725144 | biostudies-literature

ChIP-chip of Geobacter sulfurreducens PCA with antibody against various sigma factors under various conditions

2013-05-01 | GSE37778 | GEO

Analysis of the iron stimulon and fur regulon of Geobacter sulfurreducens

Project description:This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

2014-03-10 | E-GEOD-54306 | biostudies-arrayexpress

ChIP-chip of Geobacter sulfurreducens PCA with antibody against various sigma factors under various conditions

Project description:We applied a ChIP-chip approach to elucidate the binding profiles of sigma factors (RpH, RpoN and RpoS) experimentally under different growth conditions. This technique localizes DNA fragments within DNA-protein complexes enriched by chromatin immunoprecipitation using high-density oligonucleotide tilling arrays. A 10 ChIP-chip study using immunoprecipitated DNA (IP-DNA) from three culture condtions against three alternative sigma factors . The high-density oligonucleotide tiling arrays used were consisted of 381,174 oligonucleotide probes spaced 20 bp apart (30-bp overlap between two probes) across the G.sulfurreducens genome (NimbleGen). Experiments were conducted as three bioliogical replicates (different cultures).

2013-05-01 | E-GEOD-37778 | biostudies-arrayexpress

Analysis of the iron stimulon and fur regulon of Geobacter sulfurreducens

Project description:This SuperSeries is composed of the SubSeries listed below.

2014-03-10 | GSE54306 | GEO