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Transcriptome changes in C57BL/6 mice after ischemia/reperfusion injury

ABSTRACT: Renal warm ischemia-reperfusion (I/R) injury drives acute kidney injury and transplant dys-function through endoplasmic reticulum (ER) stress. Although Activating Transcription Factor 6 (ATF6) modulates ER stress resolution via the unfolded protein response, its functional role in re-nal IRI remains undefined. Using murine model of warm renal I/R and hypoxia-reoxygenation (H/R)-treated HUVECs/HK-2 cells, we systematically investigated the expression of ATF6 and molecular mechanisms through RNA-seq, ChIP, and dual-luciferase assays. IRI significantly up-regulated the expression of ATF6 in renal tissues, especially in proximal tubule epithelial cells. Functionally, ATF6 activation reduced Cr, BUN, and inflammatory cytokines, whereas genet-ic/pharmacological suppression aggravated renal tubular damage. Mechanistic studies revealed ATF6 transcriptionally represses FHL2 by direct promoter binding. The interaction between FHL2 and TRAF6 promoted the TRAF6/NF-κB signaling pathway, and the phosphorylation levels of p65 and IκBα were increased. ATF6 overexpression effectively counteracted FHL2-mediated NF-κB hyperactivation, establishing a protective axis where ATF6 mitigates inflammation via FHL2 sup-pression. This study identifies ATF6 as a renoprotective factor that suppresses FHL2 to inhibit TRAF6/NF-κB inflammation during IRI. The ATF6/FHL2/NF-κB axis provides mechanistic in-sights and therapeutic targets for ischemic renal injury and transplant complications.

ORGANISM(S): Mus musculus

PROVIDER: GSE308759 | GEO | 2026/02/13

REPOSITORIES: GEO

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