Proteomic analysis of the promotive effect of plant-derived smoke on soybean
Ontology highlight
ABSTRACT:
ORGANISM(S): Cellular Organisms
SUBMITTER: Setsuko Komatsu
PROVIDER: PXD017435 | JPOST Repository | Mon Feb 08 00:00:00 GMT 2021
REPOSITORIES: jPOST
Similar Datasets
Project description:Plant-derived smoke plays a key role in seed germination and plant growth. To investigate the effect of plant-derived smoke on chickpea, a gel-free/label-free proteomic technique was used. Germination percentage, root/shoot length, and fresh biomass were increased in chickpea treated with 2000 ppm plant-derived smoke within 6 days. On treatment with 2000 ppm plant-derived smoke for 6 days, the abundance of 90 proteins including glycolysis-related proteins significantly changed in chickpea root. Proteins related to signaling and transport were increased; however, proteins related to protein metabolism, cell, and cell wall were decreased. The sucrose synthase for starch degradation was increased and total soluble sugar was induced in chickpea. Similarly, the proteins for nitrate pathway were increased and nitrate content was improved in chickpea. On the other hand, although secondary metabolism related proteins were decreased, flavonoid contents were increased in chickpea. Based on proteomic and immuno-blot analyses, proteins related to redox homeostasis were decreased and increased in root and shoot, relatively. Furthermore, fructose-bisphosphate aldolase was increased; while, phosphotransferase and phosphoglyceromutase were decreased in glycolysis. These results suggest that plant-derived smoke improves early stage of growth in chickpea with the balance of many cascades such as glycolysis, redox homeostasis, and secondary metabolism.
2018-02-12 | PXD007875 | Pride
Project description:Soybean is an important crop with abundant protein, vegetable oil, and several phytochemicals. Meanwhile, plant-derived smoke plays a key role in plant growth. To investigate the effect of plant-derived smoke on the growth of soybean, a gel-free/label-free proteomic technique was used. The length of root including hypocotyl increased in soybean treated with 2000 ppm plant-derived smoke within 4 days. On treatment with plant-derived smoke, ribosome-related proteins increased and proteasome-related proteins decreased in roots including hypocotyl. Because arginase increased and arginosuccinate synthase/glutamine synthase decreased, the relationship between plant-derived smoke and arginine metabolism was confirmed. Metabolites related to amino acids, carboxylic acids, and sugars were mostly altered with the treatment of smoke. Amino acids related to lipid synthesis and protein phosphorylation increased; while those related to arginine metabolism intensively changed in smoke-treated soybean. In addition, nitric oxide significantly increased as well. On the other hand, under flooding stress, plant-derived smoke induced sacrifice-for-survival-mechanism-driven degradation of root tip in soybean, which promoted lateral root development during soybean recovery after flooding. These results suggest that plant-derived smoke improves early stage of growth in soybean with the balance of arginine synthesis/degradation and regulates soybean tolerance towards flooding.
2021-02-04 | PXD017367 | JPOST Repository
Project description:Proteomic analysis of the effect of plant-derived smoke in
wheat under flooding stress
2023-04-13 | PXD017690 | JPOST Repository
Project description:Effect of plant-derived smoke water on soybeans under salt stress
2023-09-04 | PXD032851 | JPOST Repository
Project description:Proteomic analysis of the effect of plant-derived smoke on soybean during recovery after flooding stress
2018-06-13 | PXD008603 | JPOST Repository
Project description:Melatonin is a well-known agent that plays multiple roles in animals. Its possible function in plants is less clear. In the present study, we tested the effect of melatonin (N-acetyl-5-methoxytryptamine) on soybean growth and development. Both spraying of leaves and seed-coating with melatonin significantly promoted soybean growth as judged from leaf size and plant height. This enhancement was also observed in soybean production and their fatty acid content. Melatonin increased pod number, seed number and seed weight. However, the 100-seed weight was not influenced by melatonin application. Melatonin also improved soybean tolerance to salt and drought stresses. Transcriptome analysis revealed that melatonin up-regulated the expression of many genes and alleviated the inhibitory effects of salt stress on gene expressions. Further detailed analysis of the affected pathways documents that melatonin likely achieved its promotional roles in soybean through enhancement of genes involved in cell division, photosynthesis, carbohydrate metabolism, fatty acid biosynthesis and ascorbate metabolism. Our results demonstrate that melatonin has significant potential for improving of soybean growth and seed production. Further study should uncover more about the molecular mechanisms of melatonin’s function in soybeans and other crops.
2014-08-31 | GSE57960 | GEO
Project description:Plant-derived soybean peroxidase stimulates osteoblast collagen biosynthesis and matrix mineralization
| PRJNA706780 | ENA
Project description:Flooding stress has a negative impact on the soybean cultivation in early growth stages. In order to understand the effect of nanosilver on the soybean growth under flooding stress, quantitative proteomics technique was used.
2016-12-14 | PXD001579 | Pride
Project description:Identify plant and pathogen genes differentially expressed during P. sojae infection of soybean cultivars differing in quantitative resistance, by using Affymetrix Soybean Genome Array analysis. Keywords: genotypic variation on quantitative resistance
2007-11-09 | GSE7124 | GEO
Project description:Melatonin is a well-known agent that plays multiple roles in animals. Its possible function in plants is less clear. In the present study, we tested the effect of melatonin (N-acetyl-5-methoxytryptamine) on soybean growth and development. Both spraying of leaves and seed-coating with melatonin significantly promoted soybean growth as judged from leaf size and plant height. This enhancement was also observed in soybean production and their fatty acid content. Melatonin increased pod number, seed number and seed weight. However, the 100-seed weight was not influenced by melatonin application. Melatonin also improved soybean tolerance to salt and drought stresses. Transcriptome analysis revealed that melatonin up-regulated the expression of many genes and alleviated the inhibitory effects of salt stress on gene expressions. Further detailed analysis of the affected pathways documents that melatonin likely achieved its promotional roles in soybean through enhancement of genes involved in cell division, photosynthesis, carbohydrate metabolism, fatty acid biosynthesis and ascorbate metabolism. Our results demonstrate that melatonin has significant potential for improving of soybean growth and seed production. Further study should uncover more about the molecular mechanisms of melatoninM-bM-^@M-^Ys function in soybeans and other crops. Four different treatments were chosen, water, salt, 100M-BM-5M melatonin and salt plus 100M-BM-5M melatonin. The comparison of salt/melatonin-treated sample versus water-treated sample reveals salt or melatonin induced transcriptome changes. The comparison of melatonin plus salt treated sample versus salt-treated sample reveals melatonin induced changes when salt exists.
2014-08-31 | E-GEOD-57960 | biostudies-arrayexpress