Proteomics

Dataset Information

Re-analysis of an ultra-deep and quantitative saliva proteome

ABSTRACT: This is a re-analysis of the saliva metaproteome dataset by Grassl et al. (Grassl et al. 2016 Genome Med, 8(1):44 DOI: 10.1186/s13073-016-0293-0) available on ProteomeXchange PXD003028. The data was used as a case study for a method development study in which we developed metaproteomics based methods for quantifying taxonomic composition of microbiomes (microbial communities). We used the fraction data from the original study for individuals 1 (female1), 3 (female3), 5 (male1), and 7 (male3).

OTHER RELATED OMICS DATASETS IN: PRJEB19901

INSTRUMENT(S):

ORGANISM(S): Homo Sapiens (human) Bacteria

TISSUE(S): Saliva

SUBMITTER: Manuel Kleiner  

LAB HEAD: Marc Strous

PROVIDER: PXD006366 | Pride | 2017-05-12

REPOSITORIES: Pride

Json Xml

Dataset's files

Source:
Action DRS
1_fractionated.msf Msf
1_fractionated.pep.xml Pepxml
20150414_QEp1_LC7_NiGr_SA_Saliva_1_fractionated1.raw Raw
20150414_QEp1_LC7_NiGr_SA_Saliva_1_fractionated2.raw Raw
20150414_QEp1_LC7_NiGr_SA_Saliva_1_fractionated3.raw Raw
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