Proteomics

Dataset Information

Investigating the autotrophic and mixotrophic metabolism of an anammox bacterium


ABSTRACT: Anaerobic ammonium oxidizing (anammox) bacteria mediate a key step in the biogeochemical nitrogen cycle and have been applied worldwide for the energy-efficient removal of nitrogen from wastewater. However, outside their core energy metabolism, little is known about the metabolic networks driving anammox bacterial anabolism and mixotrophy beyond genome predictions. Here, we experimentally resolved the central carbon metabolism using metabolomics (LC-MS and GC-MS), metabolic flux analysis and proteomics (shot-gun proteomics).

INSTRUMENT(S):

ORGANISM(S): Candidatus Kuenenia Stuttgartiensis

TISSUE(S): Cell Culture

SUBMITTER: Martin Pabst  

LAB HEAD: Martin Pabst

PROVIDER: PXD016171 | Pride | 2021-07-30

REPOSITORIES: pride

Dataset's files

Source:
Action DRS
Amx_merged_rfmt_mp_clustered_repl.fasta Fasta
Kust_uniprot_174633.fasta Fasta
MP13122018_Kust10_DDA01.mzML Mzml
MP13122018_Kust10_DDA01.raw Raw
MP13122018_Kust20_DDA01.mzML Mzml
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