Proteomics

Dataset Information

Inhibition of growth factor signaling prevents SARS-CoV-2 replication


ABSTRACT: Caco-2 cells were mock-infected or infected with SARS-CoV-2 patient isolates (in biological quintruplicates) for one hour, washed, and incubated for 24 hours before cell harvest. Extracted proteins were digested and split to 1) carry out whole-cell proteomics of a tandem mass tag (TMT) 10-plex samples using liquid chromatography synchronous precursor selection mass spectromety (LC-SPS-MS3), or 2) use Fe-NTA phosphopeptide enrichment (achieving 98% enrichment) for phospho proteome analyses of a TMT 10-plex analyzed by LC-MS2 First 5 channels = control Last 5 channels = infected

INSTRUMENT(S):

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Epithelial Cell, Colon

DISEASE(S): Covid-19

SUBMITTER: Kevin Klann  

LAB HEAD: Christian Münch

PROVIDER: PXD018357 | Pride | 2020-05-15

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
20200317_KKL_CoV2_24h_5v5_F.msf Msf
20200317_KKL_CoV2_24h_5v5_F10.raw Raw
20200317_KKL_CoV2_24h_5v5_F11.raw Raw
20200317_KKL_CoV2_24h_5v5_F12.raw Raw
20200317_KKL_CoV2_24h_5v5_F13.raw Raw
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