Proteomics

Dataset Information

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Ribosomal protein S27A pseudogene 5 is involved in monosome related RNA translation


ABSTRACT: Pseudogenes are copies of already existing genes, and while their sequences resemble the original parental gene, they contain mutations which generally render them non-functional. However, recent advances in genome analysis suggest that pseudogenes can in fact be translated and have specific functions. Ubiquitin (Ub) is an abundant protein transcribed from four different genes, increasing the potential for the generation of several pseudogenes. Through human genome analysis datamining, we gathered information regarding Ub and Ub like (Ubl) pseudogenes in order to identify potentially functional variants. Through experimental validation, we found a candidate gene RPS27AP5 which not only expresses a Ub (UbP5) but a ribosomal protein (S27aP5) as well. The precursor fusion protein is matured through cleavage and both proteins behave as their respective counterparts following translation. S27aP5 is able to integrate into translating ribosomes and its expression increases the 80S, monosomal, ribosomal fraction. The existence of a functional S27a pseudogene supports the idea that ribosomes are flexible complexes and that by exchanging certain subunits; they can perform specific translational functions giving rise to specialised ribosomes.

INSTRUMENT(S):

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Epithelial Cell, Hela Cell

DISEASE(S): Cervix Carcinoma

SUBMITTER: Dominique Levesque  

LAB HEAD: François-Michel Boisvert

PROVIDER: PXD047544 | Pride | 2026-02-03

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
Anna_DIA_HA_RPS27A.d.7z Other
Anna_DIA_HA_RPS27AP5.d.7z Other
Anna_DIA_HA_RPS27AP5b.d.7z Other
Anna_DIA_HA_RPS27AP5c.d.7z Other
Anna_DIA_HA_RPS27Ab.d.7z Other
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Publications

The pseudogene RPS27AP5 expresses ubiquitin and ribosomal protein variants with potential roles in ribosome function.

Meller Anna A   Raisch Jennifer J   Lévesque Dominique D   Fafard-Couture Etienne E   Scott Michelle M   Roucou Xavier X   Boisvert Francois-Michel FM  

Biochemistry and cell biology = Biochimie et biologie cellulaire 20250101


Pseudogenes, traditionally considered non-functional gene copies, have garnered attention due to emerging evidence of their transcription and translation. Ubiquitin is canonically expressed from UBA52 and RPS27A genes as fusion proteins, with additional polyubiquitin precursors encoded by UBB and UBC. Several pseudogenes of these loci are annotated as non-functional. Here, we report that the RPS27A pseudogene, RPS27AP5, expresses two proteins: a ubiquitin variant (UbP5) and a ribosomal protein v  ...[more]

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