Proteomics

Dataset Information

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Whole Cell and Ubiquitinated Proteome of the Endoplasmic Reticulum (ER) Stress Response to Mild Hypothermic Culture Conditions in Chinese Hamsters Ovary Cells


ABSTRACT: This study investigates the impact of mild hypothermic conditions (31°C) on the whole cell proteome and ubiquitinated proteome of Chinese hamster ovary (CHO) cells, with a specific focus on endoplasmic reticulum (ER) proteins and ER stress. Using high-resolution mass spectrometry, we conducted a comprehensive proteomic and ubiquitinated proteomic analysis to quantify changes in protein abundance and ubiquitinated peptides under mild hypothermia.

INSTRUMENT(S):

ORGANISM(S): Cricetulus Griseus (chinese Hamster) (cricetulus Barabensis Griseus)

TISSUE(S): Cell Culture

SUBMITTER: David Ryan  

LAB HEAD: Paula Meleady

PROVIDER: PXD063085 | Pride | 2025-12-22

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
CHOK1_D4_31_A.fasta Fasta
CHOK1_D4_31_A.mzML Mzml
CHOK1_D4_31_A.mzid Mzid
CHOK1_D4_31_A.raw Raw
CHOK1_D4_31_A_.fasta Fasta
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Publications

Proteomic and Ubiquitinated Proteome Insights Into ER Stress Responses in Chinese Hamster Ovary Cells Under Mild Hypothermic Conditions.

Ryan David D   Sideri Christiana-Kondylo CK   Henry Michael M   Karuppuchamy Selvaprakash S   Efeoglu Esen E   Meleady Paula P  

Biotechnology and bioengineering 20251028 1


Chinese hamster ovary (CHO) cells, widely utilised in biopharmaceutical production, experience various stressors during cell culture that can affect protein expression and folding, particularly within the endoplasmic reticulum (ER). Mild hypothermia is widely employed in CHO cell bioproduction to improve recombinant protein yield and quality; however, its impact on ER-associated pathways, particularly those governing protein folding and stress responses, remains insufficiently characterised. Mas  ...[more]

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