Proteomics

Dataset Information

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Uncovering a Fibroblast Differentiation-Based Keloid Classification by Integration of Single-cell and Bulk RNA Sequencing


ABSTRACT: Keloids are dermal fibroproliferative skin disorders caused by abnormal wound healing, resulting in impaired skin function and aesthetic defects. Abnormal fibroblast proliferation and excessive collagen deposition are involved in keloid formation. This study investigated the role of fibroblast differentiation in keloid development. Single-cell and bulk RNA sequencing data of keloids were comprehensively analyzed, and 25 clinically relevant differentially expressed fibroblast-differentiation-related genes (DEFDRGs) were identified. Based on DEFDRGs, a keloid diagnostic classification system comprising three subtypes was constructed, indicating that DEFDRGs could serve as therapeutic targets. Additionally, multiple microarray datasets, protein sequencing data, and immunohistochemical analyses of key markers in clinical keloid samples were used for further verification. In conclusion, this study established a molecular classification of keloids based on fibroblast differentiation, contributing to the further understanding of keloid pathogenesis and providing new insights for diagnosis and treatment.

INSTRUMENT(S):

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Skin

SUBMITTER: Wei Zhang  

LAB HEAD: Shizhao Ji

PROVIDER: PXD066833 | Pride | 2025-10-06

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
Results.zip Other
XB04182B1DA_NOR164_16_S3-B2_1_10722.d.zip Other
XB04182B1DA_NOR164_9_S3-B1_1_10721.d.zip Other
XB04182B1DA_NOR197_3_S3-A12_1_10720.d.zip Other
XB04182B1DA_NOR202_1_S3-A11_1_10719.d.zip Other
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Publications

Uncovering a fibroblast differentiation-based keloid classification by integration of single-cell and bulk RNA sequencing.

Zhang Wei W   Lu Jianyu J   Tong Xirui X   Xie Sujie S   Xian Shuyuan S   Liu Yifan Y   Yan Jiale J   Qian Weijin W   Sun Hanlin H   Zhu Yushu Y   Jiang Luofeng L   Guo Xinya X   Ding Xinran X   Li Yixu Y   Bai Chenguang C   Huang Runzhi R   Xia Zhaofan Z   Ji Shizhao S  

Communications biology 20250930 1


Keloids are dermal fibroproliferative skin disorders caused by abnormal wound healing, resulting in impaired skin function and aesthetic defects. Abnormal fibroblast proliferation and excessive collagen deposition are involved in keloid formation. This study investigated the role of fibroblast differentiation in keloid development. Single-cell and bulk RNA sequencing data of keloids were comprehensively analyzed, and 25 clinically relevant differentially expressed fibroblast-differentiation-rela  ...[more]

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