Citrus Reshni
Ontology highlight
ABSTRACT:
PROVIDER: PRJEB78477 | ENA |
REPOSITORIES: ENA
Dataset's files
| Action | DRS | |||
|---|---|---|---|---|
| CHF_AAAM_DLS_2_FURG-STOL-PRVJ-JNWU_A.bnx.gz | Other | |||
| CHF_AAAM_NLRS_2_INVI-SKOL-PRTZ-JNWU_A.bnx.gz | Other | |||
| Citrus_reishni_BspQ1.cmap | Other | |||
| Citrus_reishni_DLE1.cmap | Other | |||
| ERR13420745.fastq.gz | Fastqsanger.gz |
Items per page: 5 1 - 5 of 17 |
Similar Datasets
Project description:Citrus micrantha, genomic, optical mapping and transcriptomic data
| PRJEB78372 | ENA
Project description:Citrus medica, genomic, optical mapping and transcriptomic data
| PRJEB78445 | ENA
Project description:Citrus australasica, genomic, optical mapping and transcriptomic data
| PRJEB78475 | ENA
Project description:The postharvest senescence processes of citrus fruits were analyzed transcriptomic. The present study was aimed to: further uncover the rind-flesh communication of hesperidium; characterize the differential storage behaviors of different citrus varieties; reveal the important changes during storing process; and demonstrate the specific non-climacteric characteristics of citrus fruits.
2014-12-03 | GSE63706 | GEO
Project description:The postharvest senescence processes of citrus fruits were analyzed transcriptomic. The present study was aimed to: further uncover the rind-flesh communication of hesperidium; characterize the differential storage behaviors of different citrus varieties; reveal the important changes during storing process; and demonstrate the specific non-climacteric characteristics of citrus fruits. We chose four major table fruit varieties of citrus: satsuma mandarin (Citrus unshiu Marc) (M), ponkan (Citrus reticulata Blanco) (K), newhall navel orange (Citrus sinensis L. Osbeck) (O) and shatian pummelo (Citrus grandis Osbeck) (P). They were sampled every 10 days during 50 DAH (days after harvest), almost covering the commercial storage period of loose-skin citrus.
2014-12-03 | E-GEOD-63706 | biostudies-arrayexpress
Project description:Fruit ripening in Citrus is not well understood at the molecular level. Knowledge of the regulatory mechanism of citrus fruit ripening at the post-transcriptional level in particular is lacking. Here, we comparatively analyzed the miRNAs and their targeted genes in a spontaneous late-ripening mutant, ?Fengwan? sweet orange (MT) (Citrus sinensis L. Osbeck), and its wild-type counterpart ('Fengjie 72-1', WT). Using high-throughput sequencing of small RNAs and RNA degradome tags, we identified 107 known and 21 novel miRNAs, as well as 225 target genes. A total of 24 miRNAs (16 known miRNAs and 8 novel miRNAs) were shown to be differentially expressed between MT and WT. The expression pattern of several key miRNAs and their target genes during citrus fruit development and ripening stages was examined. Csi-miR156k, csi-miR159 and csi-miR166d suppressed specific transcription factors (GAMYBs, SPLs and ATHBs) that are supposed to be important regulators involved in citrus fruit development and ripening. In the present study, miRNA-mediated silencing of target genes was found under complicated and sensitive regulation in citrus fruit. The identification of miRNAs and their target genes provide new clues for future investigation of mechanisms that regulate citrus fruit ripening.
2017-02-10 | GSE84191 | GEO
Project description:Gene deletion analysis of three independent gametoclones of Citrus clementina by comparative genomic hybridization
2013-11-12 | E-MEXP-3926 | biostudies-arrayexpress
Project description:Drought, heat and high light irradiation are abiotic stresses that negatively affect plant development and reduce crop productivity. The confluence of these three factors is common in nature, causing extreme situations for plants that compromise their viability. Drought and heat stress increase the saturation of the photosystem’s reaction centers, increasing sensitivity to high light irradiation. In addition, these stress conditions affect PSII integrity, alter redox balance of the electron transport chain and decrease photosynthetic rate. Here, we studied the effect of drought, high light and heat stress factorial stress combination on the photosynthetic apparatus of two citrus rootstocks, Carrizo citrange (Citrus sinensis × Poncirus trifoliata) and Cleopatra mandarin (Citrus reshni). Proteomic data, together with transcriptomic, showed the main responses of citrus plant to multiple abitoic stress conditions. The enhancement of KEGG pathways such as RNA metabolic processes and the accumulation of family proteins like HSPs were key responses to face the combination of these abiotic stress factors.
2023-03-11 | PXD034419 | Pride
Project description:An antifungal aroma substance, 2-phenylethanol (PEA), was isolated from antagonistic yeast strain Kloeckera apiculata extract. Microarry were used to analyse its role citrus. We used microarrays to detail the global programme of gene expression underlying Citrus were treated with 1.0x108 cells/ml K. apiculata (KA), PEA (0.15%), the extract (1000xdilute) and control (CK) for 24 h,
2014-01-01 | GSE45680 | GEO
Project description:An antifungal aroma substance, 2-phenylethanol (PEA), was isolated from antagonistic yeast strain Kloeckera apiculata extract. Microarry were used to analyse its role citrus. We used microarrays to detail the global programme of gene expression underlying Citrus were treated with 1.0x108 cells/ml K. apiculata (KA), PEA (0.15%), the extract (1000xdilute) and control (CK) for 24 h, An antifungal aroma substance, 2-phenylethanol, was isolated from antagonistic yeast strain Kloeckera apiculata. To analyse its role in Citrus response,Citrus were treated with K. apiculata , 2-phenylethano (0.15%), the extract (1000xdilute) and control (CK) for 24 h, respectively. The fresh epicarp of citrus was separated by knife and directly frozen in liquid nitrogen for RNA extraction and hybridization on Affymetrix microarrays.
2014-01-01 | E-GEOD-45680 | biostudies-arrayexpress