Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Tigecycline resistant Streptococcus pneumoniae R6

PROVIDER: PRJEB8615 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR766367_1.fastq.gz	Fastqsanger.gz
	ERR766367_2.fastq.gz	Fastqsanger.gz
	ERR766368_1.fastq.gz	Fastqsanger.gz
	ERR766368_2.fastq.gz	Fastqsanger.gz
	ERR766369_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 20

Similar Datasets

Dias2019 - GSM model of S. pneumoniae R6

Project description:Phenotypically Reconciled Genome-scale Metabolic Model for the Metabolism of Streptococcus pneumoniae Strain R6.

2024-10-15 | BIOMD0000001090 | BioModels

Streptococcus pneumoniae. Two-color microarray bases Gene Expression Analysis v.6.5

Project description:TIGR4 and R6 bacterial strains of Streptococcus pneumoniae treated and not treated with the iron chelator deferoxamine mesylate (DFO)

2018-01-27 | GSE109693 | GEO

Transcription profiling of S. pneumoniae R6 treated with Novobiocine

Project description:Treatment of Streptococcus pneumoniae R6 with 40 µg/ml Novobiocin

2010-07-01 | E-MTAB-141 | biostudies-arrayexpress

CCCB - Genomic variation

Project description:Antibiotic resistance in Streptococcus pneumoniae is often the result of horizontal gene transfer events involving closely related streptococcal species. Laboratory experiments confirmed that S. mitis DNA functions as donor in transformation experiments, using the laboratory strain S. pneumoniae R6 as recipient and chromosomal DNA of a high level penicillin resistant S. mitis B6 strain. After four transformation steps, alterations in five penicillin-binding proteins (PBP) were observed, and sequence analysis confirmed recombination events in the corresponding PBP genes. In order to detect regions where recombination with S. mitis DNA has occurred we analyzed the S. pneumoniae transformants by microarray analyses, using oligonucleotide microarrays designed for the S. pneumoniae genome and the S. mitis B6 genome as well.

2011-04-21 | E-MEXP-3170 | biostudies-arrayexpress

Microarray-based transcription profiling of Streptococcus pneumoniae R6 delta rgtA ,delta rgtD and delta cpoA

Project description:Alterations in genes for penicillin-binding proteins (pbp) are well-known determinants for the resistance of Streptococcus pneumoniae to B-lactam antibiotics. Surprisingly, some mutations in non-pbp genes were also found to contribute to B-lactam resistance. Two of them discovered in the piperacillin resistant mutants P106 and P104, affect the expression of cpoA (encoding a glycosyltransferase) and of the rgtABCDHR cluster (encoding two small membrane proteins, an ABC transporter and a regulatory two-component system), respectively. cpoA and rgtABCDHR are involved in maintaining the synthesis and the proper ratio of the two major membrane glycolipids, and deletions in these genes led to complex phenotypes. In attempts to identify genetic determinants for these phenotypes, the global trancription patterns of the deletion mutants R6 delta cpoA, R6 delta rgtA and R6 delta rgtD were compared to that of the parent strain R6.

2011-04-02 | E-MEXP-2923 | biostudies-arrayexpress

Proteome of klebsiella pneumoniae KP124 and KP126

Project description:Proteome of klebsiella pneumoniae KP124andKP126, KP124 is sensitive to tigecycline, KP126 is resistant to tigecycline.

2025-07-24 | PXD066522 |

Proteomic analysis of carbapenem-resistant Klebsiella pneumoniae exposure to tigecycline and aminoglycosides

Project description:Proteomic analysis of carbapenem-resistant Klebsiella pneumoniae exposure to tigecycline and aminoglycosides

2022-01-17 | PXD031030 |

Project description:Whole genome sequencing of trimethoprim-resistant Streptococcus pneumoniae R6

| PRJNA481780 | ENA

Comparative genomic hybridization of three Streptococcus pneumoniae strains

Project description:We performed a comparative study of the two control sample options with a Streptococcus pneumoniae microarray designed with three fully sequenced strains. We hybridized two of these strains (R6 and G54) as test samples using the third strain alone (TIGR4) or a mix of the three strains as the control sample.

2008-04-30 | E-MEXP-1390 | biostudies-arrayexpress

Streptococcus pneumoniae R6

Project description:Streptococcus pneumoniae R6 genomic DNA

| PRJNA251531 | ENA