Project description:in order to understand the role of phloems of apple dwarfing rootstocks,and investigated the expression differences of dwarfing and vigorous apple stocks in the phloem tissue at active growing stage. The phloem tissue at active growing stage(60 DABB(days after buds break) of three apple dwarfing rootstocks including M9,B9,A1d(a partial GA insensitive mutant of Malus hupensis)and two vigorous apple rootstock PYTC ( WT of Malus hupensis) and M. sylvestris were sampled and underwent RNA-Seq analysis.
Project description:In order to understand the role of phloems of apple dwarfing rootstocks,and investigated the expression differences of dwarfing and vigorous apple stocks in the bud break stage, The phloem tissue at bud break stage(0 DABB(days after buds break) of three apple rootstocks including A1d(a partial GA insensitive mutant of Malus hupehensis ),WT Malus hupehensis and were QZ1(a hybrid of Malus hupensis and a Cylindrical apple variety) were sampled and underwent RNA-Seq analysis.
Project description:This dataset relates to a proteomic analysis of Ave1 homologs in the fungal pathogens Venturia pirina and Venturia inequalis. These species are the cause of scab disease on European pear (Pyrus communis) and apple (Malus pumila). Sample preparation for both V. pirina and V. inequalis was designed to focus on effectors and eliminate host proteins. To do this the fungi were grown in vitro, on cellophane sheets mimicing the growth habit in infected leaves and proteins were extracted using a gentle washing procedure designed to avoid cell wall breakage. LC-MS/MS data was queried against a protein database generated from gene predictions obtained from whole genome sequences of V. pirina and V. inequalis.
Project description:Transcriptional profiling of various apple (Malus x domestica Borkh) organ systems using probes complementary to both sense and anti-sense transcripts. Eight apple organs/samples. Biological replicates: 2 for each sample, independently grown and harvested.
Project description:This RNA-seq experiment captures expression data from challenged and mock-inoculated apple flowers (Malus domestica Golden Delicious) to assess the susceptible response of the primary infection court (48h) of apple by the fire blight pathogen Erwinia amylovora (CFBP 1430).
Project description:Transcriptional profiling of various apple (Malus x domestica Borkh) organ systems using probes complementary to both sense and anti-sense transcripts.