Ontology highlight
ABSTRACT:
PROVIDER: PRJEB95005 | ENA |
REPOSITORIES: ENA
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Project description:This study explores the whole genome genotyping-array profiles of 96 Orang Asli from Malaysia
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Project description:Purpose: Helminth infection and dietary intake can affect the intestinal microbiota, as well as the immune system. Methods: Here we analyzed the relationship between fecal microbiota and blood profiles of indigenous Malaysians, referred to locally as Orang Asli, in comparison to urban participants from the capital city of Malaysia, Kuala Lumpur. Results: We found that helminth infections had a larger effect on gut microbial composition than did dietary intake or blood profiles. Trichuris trichiura infection intensity also had the strongest association with blood transcriptional profiles. By characterizing paired longitudinal samples collected before and after deworming treatment, we determined that changes in serum zinc and iron levels among the Orang Asli were driven by changes in helminth infection status, independent of dietary metal intake. Serum zinc and iron levels were associated with changes in the abundance of several microbial taxa. Conclusions: There is considerable interplay between helminths, micronutrients and the microbiota on the regulation of immune responses in humans.
2019-10-01 | GSE137338 | GEO
Project description:Klebsiella pnuemoniae from Orang asli communities
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Project description:Comparison of expression in liver samples of human, chimp, orang and rhesus, by using a novel multi-species cDNA array Keywords: other
2005-01-25 | GSE2009 | GEO
Project description:Skin metagenomes, Trichophyton Genome sequencing from the Orang Asli
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Project description:Comparison of Genotyping using pooled DNA samples (Allelotyping) and Individual Genotyping using the Affymetrix Genome-Wide Human SNP Array 6.0 In this study, data from 100 DNA samples individually genotyped with the Affymetrix Genome-Wide Human SNP Array 6.0 were used to estimate the error of the pooling approach by comparing the results with those obtained using the same array type but DNA pools each composed of 50 of the same samples. Newly developed and established methods for signal intensity correction were applied. Furthermore, the relative allele intensity signals (RAS) obtained by allelotyping were compared to the corresponding values derived from individual genotyping. Similarly, differences in RAS values between pools were determined and compared.
2013-06-22 | GSE48190 | GEO
Project description:This dataset genotypes the genome of the Orang Asli Bateq and Orang Asli Termiar using Illumina Omni Human 2.5
2025-08-07 | PRJEB95005 | EVA