Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Genome Sequencing of Nilaparvata muiri China Single Male Adult Using PacBio Ultra-low Input Long-Read Technology

PROVIDER: PRJNA1091440 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR28434349_1.fastq.gz	Fastqsanger.gz
	SRR28434349_2.fastq.gz	Fastqsanger.gz
	SRR28434350_1.fastq.gz	Fastqsanger.gz
	SRR28434350_2.fastq.gz	Fastqsanger.gz
	SRR28434351_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 33

Similar Datasets

Nilaparvata muiri

Project description:Nilaparvata muiri overview

| PRJNA1090180 | ENA

Project description:PacBio Ultra Low Input HiFi Reads

| PRJNA657245 | ENA

Nilaparvata muiri

Project description:Nilaparvata muiri Genome sequencing

| PRJNA1089788 | ENA

Pacbio Hifi sequencing of a naked mole-rat male subordinate kidney sample

Project description:Two PacBio Hifi sequencing runs from the kidney of a single male NMR sample used to make the mHetGla4.1.primary genome assembly. Specifically, we assembled a second NMR genome from an unrelated male of a separate captive colony in Toronto, Canada, using PacBio HiFi (155.8 Gb, read N50 = 11.45 Kb) and ONT-LSK (299.6 Gb, read N50 = 10.1 Kb) reads (contig N50 = 75.7 Mb, Compleasm S = 98%). This accession stores the Pacbio Hifi data for this independent assembly.

2026-08-05 | E-MTAB-17313 | biostudies-arrayexpress

Project description:Genome Sequencing of Nilaparvata muiri

| PRJNA1093154 | ENA

Multi-tissue transcriptome sequencing of Quasipaa spinosa from Fujian Province, China for genome annotation

Project description:This dataset provides transcriptome sequencing data from a cultured female Quasipaa spinosa individual collected in Taining, Fujian Province, China (Q. spinosa-FJTN). The transcriptomic data were generated to support genome annotation of a newly assembled chromosome-scale reference genome. Ten adult tissues, including brain, heart, liver, kidney, lung, intestine, skin, spleen, ovary, and testis, were sampled, and total RNA was extracted separately from each tissue. Equal amounts of high-quality RNA from all tissues were pooled to construct a comprehensive RNA sequencing library. The resulting transcriptome dataset was generated using the DNBSEQ sequencing platform and provides expressed sequence evidence for protein-coding gene prediction and functional annotation. These data complement long-read genome sequencing resources, including PacBio HiFi, Oxford Nanopore ultra-long reads, and Hi-C sequencing, and contribute to the development of genomic resources for Q. spinosa population genetics, comparative genomics, conservation studies, and selective breeding.

2026-08-31 | GSE345096 | GEO

ONT R10.4-Lsk sequencing of a naked mole-rat male subordinate. Sheared kidney, unsheared kidney, and brain samples

2026-08-06 | E-MTAB-17334 | biostudies-arrayexpress

Pacbio Hifi sequencing of a male cape dune mole-rat kidney sample

Project description:One PacBio Hifi sequencing run from the kidney of a single male CDMR (Bathyergus suillus) sample used to make the mBatSui1.1.primary genome assembly as an evolutionary comparator to our telomere-to-telomere naked mole-rat genome assembly. Specifically, we assembled a CDMR from a wild-derived sample in South African cape and sequenced in Toronto, Canada, using PacBio HiFi (89 Gb, read N50 = 18 Kb) and ONT-ULK (55 Gb, read N50 = 43 Kb) reads (contig N50 = 33 Mb, Compleasm S = 99%, QV = 71.0). This accession stores the Pacbio Hifi data for this assembly.

2026-08-05 | E-MTAB-17312 | biostudies-arrayexpress

long read scRNA-seq from adrenal gland (ENCSR497PUD)

Project description:PacBio long-read B6/Cast F1 adrenal P2mo male normal 2k For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

2026-02-28 | GSE322042 | GEO

long read scRNA-seq from layer of hippocampus (ENCSR674HUF)

Project description:PacBio long-read B6/Cast F1 hippocampus P2mo male normal 2k For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

2026-02-28 | GSE321017 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data