Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Fructose utilization of Cupriavidus necator H16

PROVIDER: PRJNA1187270 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR31374376_1.fastq.gz	Fastqsanger.gz
	SRR31374376_2.fastq.gz	Fastqsanger.gz
	SRR31374377_1.fastq.gz	Fastqsanger.gz
	SRR31374377_2.fastq.gz	Fastqsanger.gz
	SRR31374378_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

Project description:Fructose utilization of Cupriavidus necator H16

| PRJNA1260171 | ENA

Cupriavidus necator H16

Project description:Fructose utilization of Cupriavidus necator H16

| PRJNA1260147 | ENA

Project description:Fructose utilization of Cupriavidus necator H16

| PRJNA1260669 | ENA

Elucidating photorespiration pathways in a chemolithoautotroph

Project description:We investigate photorespiration pathways in the chemoautotroph Cupriavidus necator H16 when growing autotropically on hydrogen and carbon dioxide via the Calvin Cycle. We demonstrate an upregulation of the glycerate pathway under photorespiration (ambient carbon dioxide) conditions

2020-01-31 | GSE141999 | GEO

Replacing the Calvin cycle with the reductive glycine pathway in Cupriavidus necator

Project description:These data belong to a metabolic engineering project that introduces the reductive glycine pathway for formate assimilation in Cupriavidus necator. As part of this project we performed short-term evolution of the bacterium Cupriavidus necator H16 to grow on glycine as sole carbon and energy source. Some mutations in a putiative glycine transporting systems facilitated growth, and we performed transcriptomics on the evolved strain growing on glycine. Analysis of these transcriptomic data lead us to the discovery of a glycine oxidase (DadA6), which we experimentally demonstrated to play a key role in the glycine assimilation pathay in C. necator.

2020-06-06 | GSE151887 | GEO

Investigation of protein allocation and utilization in the versatile chemolithoautotroph Cupriavidus necator

Project description:The aim of this study was to understand how autotrophic (CO2-fixing) bacteria balance the different needs for substrate assimilation, growth functions, and resilience in order to thrive in their environment.To this end, the proteome of the model chemolithoautotroph Ralstonia eutropha a.k.a. Cupriavidus necator was studied in different environmental conditions (four limiting substrates, and five different growth rates). Cupriavidus was cultivated in substrate-limited chemostats with fructose, formate, succinate and ammonium limitation to obtain steady state cell samples. The dilution rate/growth rate was increased step-wise from 0.05 to 0.25 1/h in 0.05 steps. Protein quantity was determined by LC-MS, and enzyme utilization was investigated by resource balance analysis modeling.

2022-02-17 | PXD024819 | Pride

Cupriavidus necator H16

Project description:Cupriavidus necator H16 Raw sequence reads

| PRJNA802999 | ENA

Project description:Genome sequencing of Cupriavidus necator H16

| PRJNA1232247 | ENA

Cupriavidus necator H16

Project description:Cupriavidus necator H16 Genome sequencing and assembly

| PRJNA1086218 | ENA

Cupriavidus necator H16

Project description:Genome sequencing results of Cupriavidus necator H16 mutant.

| PRJNA1162438 | ENA