Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

GPNMB is a marker of invasive quiescent differentiated melanoma cells driven by tumor niche reprogramming

ABSTRACT: GPNMB is a marker of invasive quiescent differentiated melanoma cells driven by tumor niche reprogramming

PROVIDER: PRJNA1218712 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR32215558.fastq.gz	Fastqsanger.gz
	SRR32215558_1.fastq.gz	Fastqsanger.gz
	SRR32215558_2.fastq.gz	Fastqsanger.gz
	SRR32215559.fastq.gz	Fastqsanger.gz
	SRR32215559_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

GPNMB is a marker of invasive quiescent differentiated melanoma cells driven by tumor niche reprogramming

Project description:GPNMB is a marker of invasive quiescent differentiated melanoma cells driven by tumor niche reprogramming

| PRJNA1055576 | ENA

GPNMB is a marker of invasive quiescent differentiated melanoma cells driven by tumor niche reprogramming.

Project description:GPNMB is a marker of invasive quiescent differentiated melanoma cells driven by tumor niche reprogramming.

| PRJNA1219121 | ENA

GPNMB is a marker of invasive quiescent differentiated melanoma cells driven by tumor niche reprogramming

Project description:We provide evidence of the existence of a slow cycling melanoma population isolated in vivo from melanoma PDXs using the H2B-GFP system. Single cell transcriptomic analysis unveils a significant transcriptional heterogeneity of GFP-retaining slow cycling cells, defining a quiescent subpopulation of cells. These cells show a different phenotype in primary tumors and matched metastases, suggesting that tumor niche pressure drives a transcriptional reprogramming of quiescent cells during melanoma progression.

2025-05-29 | GSE288622 | GEO

GPNMB is a marker of invasive quiescent differentiated melanoma cells driven by tumor niche reprogramming

2025-05-29 | GSE251865 | GEO

GPNMB is a marker of invasive quiescent differentiated melanoma cells driven by tumor niche reprogramming.

Project description:This SuperSeries is composed of the SubSeries listed below.

2025-05-29 | GSE288716 | GEO

Transcriptional profiling of the Arabidopsis root quiescent center

Project description:The Arabidopsis quiescent center (QC) is a small group of cells with low mitotic activity located at the center of the root stem cell niche. Its transcriptional profile was previously analyzed using two repeats of cells FACS isolated using the AGL42 marker. To get more power in analyzing QC transcriptional profile, we generated three additional samples of the QC, using the QC-specific marker WOX5. Three replicates of FACS-sorted GFP-positive cells from WOX5:GFP roots.

2014-12-17 | E-GEOD-64253 | biostudies-arrayexpress

Mechanical Compression Creates a Quiescent Muscle Stem Cell Niche

Project description:Mechanical Compression Creates a Quiescent Muscle Stem Cell Niche

| PRJNA803272 | ENA

Transcriptional profiling of the Arabidopsis root quiescent center

Project description:The Arabidopsis quiescent center (QC) is a small group of cells with low mitotic activity located at the center of the root stem cell niche. Its transcriptional profile was previously analyzed using two repeats of cells FACS isolated using the WOX5 marker. To get more power in analyzing QC transcriptional profile, we generated three additional samples of the QC, using the QC-specific marker WOX5.

2014-12-17 | GSE64253 | GEO

Microarray gene expression profiling of a fibrosarcoma GPNMB-induced cell line MCA-1-GPNMB at basal condition and in the form of spheroids

Project description:The expression of the soluble protein GPNMB (glycoprotein non-metastatic melanoma protein B) induces an aggressive behavior of tumor cells by promoting proliferation and distant spread. The main molecular feature is the over expression of interleukin Il-33. The gene profile of MCA-1-GPNMB and MCA-1-GPNMB-spheroid cell line was assessed against MCA-1-Mock.

2020-07-30 | E-MTAB-8082 | biostudies-arrayexpress

Quiescent cancer cells resist T cell attack by forming an immunosuppressive niche

Project description:Quiescent cancer cells resist T cell attack by forming an immunosuppressive niche

| PRJNA816518 | ENA