Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Wastewater sample

ABSTRACT: Metagenome from wastewater samples

PROVIDER: PRJNA1235110 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR32793300_1.fastq.gz	Fastqsanger.gz
	SRR32793300_2.fastq.gz	Fastqsanger.gz
	SRR32793301_1.fastq.gz	Fastqsanger.gz
	SRR32793301_2.fastq.gz	Fastqsanger.gz
	SRR32793290_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 192

Similar Datasets

Project description:Shot-gun metagenomic sequencing of onion foliage

| PRJNA904248 | ENA

Life on the edge: Functional genomic response of Ignicoccus hospitalis to cellular takeover by Nanoarchaeum equitans

2014-04-24 | GSE57033 | GEO

Metagenomic (WGS/Shot-gun) sequencing of Bovine Colostrum

Project description:Metagenomic (WGS/Shot-gun) sequencing of Bovine Colostrum Raw sequence reads

| PRJNA1367381 | ENA

Genome sequencing of Afzelia xylocarpa from Thailand

Project description:Shot-gun WGS of Afzelia xylocarpa

| PRJEB51213 | ENA

Life on the edge: Functional genomic response of Ignicoccus hospitalis to cellular takeover by Nanoarchaeum equitans

Project description:Investigation of changes in global gene expression patterns as Ignicoccus hospitalis becomes increasingly populated by Nanoarchaeum equitans These microarray data are complemented by shot gun proteomics (see manuscript) A total of 16 chips were used (each experimental sample was done in duplicate, totally 8 samples) to examine total RNA from I. hospiatalis over a time course grown in pure culture and in co-culture with N. equitans.

2014-04-24 | E-GEOD-57033 | biostudies-arrayexpress

Project description:Shot gun sequencing of genomes of Iberian freshwater fish species

| PRJNA902967 | ENA

Comparative Microbial Metagenomic Analysis of Drinking Water Plants and Wastewater Treatment Plants in Istanbul

Project description:Wastewater treatment plants (WWTPs) and Drinking water treatment plants (DWTPs) are critical points for public health for persistently remaining microorganisms after treatment may pose a risk. This study aimed to conduct microbial metagenomic analyses on waters from both DWTPs and WWTPs under the Istanbul Water and Sewerage Administration (ISKI). In this study a total of 52 samples were included, comprising 18 samples from DWTPs and 34 from WWTPs. All water samples underwent pre-isolation filtration. DNA isolation was conducted using filter material, followed by library preparation and sequencing on a NovaSeq 6000 instrument following the manufacturer's guidelines.

2025-01-09 | E-MTAB-14353 | biostudies-arrayexpress

594633cc-f024-40c8-91da-1eeddd71f139 - samples

Project description:156 samples of shot-gun gut metagenomics, corresponding to 51 patients with CRCm 54 patients with adenoma, and 51 healthy controls

| EGAD00001010068 | EGA

Project description:Shot gun metagenome of mesophilic anaerobic digestion of sewage sludge

| PRJNA1210816 | ENA

TranslationalLandscape_HumanHeart

Project description:Here, we analyze the expression of predicted microproteins in human heart tissue and iPSC cardiomyocytes, using shot-gun proteomics and SRM. 4 identified candidates were functionally validated by interactome studies using AP-MS (affinity purification coupled to mass spectrometry). In addition, the impact of disease-causing protein-truncating variants on translation was studied in rat heart tissue by performing shot-gun proteomics.

2019-06-04 | PXD012593 | Pride

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data