Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Fusarium oxysporum

ABSTRACT: Fusarium oxysporum Genome sequencing and assembly

PROVIDER: PRJNA306247 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR3108599.fastq.gz	Fastqsanger.gz
	SRR3139020_1.fastq.gz	Fastqsanger.gz
	SRR3139020_2.fastq.gz	Fastqsanger.gz
	SRR3139030_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 74

Similar Datasets

Comparative O-glycoproteomics of Fusarium oxysporum

Project description:Fusarium oxysporum causes Fusarium wilt syndrome in more than 120 different plant hosts, including globally important crops such as tomato, cotton, banana, melon, etc. F. oxysporum shows high host specificity in over 150 formae speciales and have been ranked in the top 10 plant fungal pathogens. Although three PMTs encoded by the pmt1, pmt2, and pmt4 are annotated in the genome of F. oxysporum, their functions have not been reported. As O-mannosylation is not found in plants, a comprehensive understanding of PMTs in F. oxysporum becomes attractive for the development of new strategy against Fusarium wilt. In order to understand the molecular mechanism of the differential functions of three PMTs, a comparative O-glycoproteome analysis of the pmt mutants were carried out.

2019-10-28 | PXD012530 | Pride

Fusarium oxysporum

Project description:Fusarium oxysporum Genome sequencing and assembly

| PRJNA412392 | ENA

Fusarium oxysporum

Project description:Fusarium oxysporum Genome sequencing and assembly

| PRJNA578477 | ENA

Fusarium oxysporum

Project description:Fusarium oxysporum Genome sequencing

| PRJNA1198635 | ENA

Genome Sequencing and Comparative Transcriptomics of Race1 and Race4 of Banana pathogen: Fusarium oxysporum f.sp. Cubense

Project description:Deep sequencing of mRNA from Fusarium oxysporum f. sp. Cubense 1 and 4 after infecting Musa acuminata 0h and 48h.

2014-08-27 | GSE40581 | GEO

Fusarium oxysporum

Project description:Fusarium oxysporum mitogenome assembly

| PRJNA1122527 | ENA

Expression data from Capsicum annuum inoculated with Fusarium oxysporum Fo47

Project description:The colonization of Capsicum annuum roots by Fusarium oxysporum Fo47 induces resistance responses on the plant. Fo47 is a non-pathogenic strain of Fusarium oxysporum. Fo47 colonizes only the most outer layers of the root surface but it does not colonize inner tissues. Pre-treatment of roots with Fo47 reduces the symptom development produced by later pathogen inoculation. The expression of genes in distal tissues was determined by microarray analysis of stems of Fo47-treated plants. Capsicum annuum samples were analyzed using Affymetrix chips of the close-related species Solanum lycopersicum.

2021-06-02 | GSE49432 | GEO

Genome Sequencing and Comparative Transcriptomics of Race1 and Race4 of Banana pathogen: Fusarium oxysporum f.sp. Cubense

Project description:Deep sequencing of mRNA from Fusarium oxysporum f. sp. Cubense 1 and 4 after infecting Musa acuminata 0h and 48h. Analysis of ploy(A)+ RNA of different hours after infecting of Musa acuminata

2014-08-27 | E-GEOD-40581 | biostudies-arrayexpress

Fusarium oxysporum II5

Project description:Fusarium oxysporum II5 Genome sequencing and assembly

| PRJNA859936 | ENA

Fusarium oxysporum

Project description:Fusarium oxysporum Genome sequencing and assembly for marker discovery

| PRJNA389501 | ENA