Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Tissue-specific gene expression changes in l(3)mbt mutant ovaries [soma]

ABSTRACT: Tissue-specific gene expression changes in l(3)mbt mutant ovaries [soma]

PROVIDER: PRJNA427341 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR6413574_1.fastq.gz	Fastqsanger.gz
	SRR6413574_2.fastq.gz	Fastqsanger.gz
	SRR6413575_1.fastq.gz	Fastqsanger.gz
	SRR6413575_2.fastq.gz	Fastqsanger.gz
	SRR6413576_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

Tissue-specific gene expression changes in l(3)mbt mutant ovaries [soma]

Project description:We performed RNAseq on l(3)mbt mutant somatic ovaries to gain a genome-wide view of tissue-specific gene expression changes in L(3)mbt-depleted somatic ovaries.

2018-02-01 | GSE108472 | GEO

Tissue-specific gene expression changes in l(3)mbt mutant ovaries [germline]

Project description:We performed RNAseq on embryos laid by somatically complemented l(3)mbt mutant germline to gain a genome-wide view of tissue-specific gene expression changes in L(3)mbt-depleted germline.

2018-02-01 | GSE108471 | GEO

Tissue-specific gene expression changes in l(3)mbt mutant ovaries

Project description:Tissue-specific gene expression changes in l(3)mbt mutant ovaries

| PRJNA427340 | ENA

Tissue-specific gene expression changes in l(3)mbt mutant ovaries [germline]

Project description:Tissue-specific gene expression changes in l(3)mbt mutant ovaries [germline]

| PRJNA427342 | ENA

Tissue-specific gene expression changes in l(3)mbt mutant ovaries

Project description:This SuperSeries is composed of the SubSeries listed below.

2018-02-01 | GSE108473 | GEO

Transcriptional profiles of sov mutant ovaries

Project description:Transcriptional profiles of sov mutant ovaries

| PRJNA454717 | ENA

Transcriptome of yw fly, L(3)mbt mutant fly and Lint-O mutant fly were performed in triplicate in Drosophila melanogaster

Project description:L(3)mbt regulates the transcription of germ-specific genes in somatic cells but the detailed mechanism remains unclear. We performed ChIP-seq of L(3)mbt and a newly identified interactor in OSCs to elucidate the genome-wide localization. Then we performed RNA-seq of OSCs before and after RNAi treatment of L(3)mbt and its interactors and performed differential expression analysis.

2022-08-14 | GSE205541 | GEO

Cut&Run in Drosophila melanogaster control, mutant and knockdown ovaries

Project description:H3K27me3 profiles using Cleavage under targets and Release using nuclease (Cut&Run) in control and KD Drosophila melanogaster ovaries. We examined the impact on chromatin profiles in Drosophila melanogaster ovaries in which the lid, the Sin3a, the Snr1 or the mod(mdg4) gene have been selectively knocked down by tissue-specific shRNA expression. We additionally explored H3K27me3 and H3K9me3 in control and dhd mutant ovaries either carrying or not a transgene.

2021-12-10 | GSE174250 | GEO

Expression data from Foxl2 wild-type and mutant ovaries and testes

Project description:Foxl2 is a forkhead transcription factor expressed only in the female, but not in the male gonad. We have created mice homozygous mutant for the Foxl2 gene (KO) as well as mice carrying a conditional mutant Foxl2 allele (floxed). The expression profiles of conventional Foxl2 knockout and wildtype ovaries were compared at P3, using the Affy Mouse Genome 430 2.0 Array. Adult wildtype and conditional mutant (Foxl2 floxed x RosaCre-EBD treated with tamoxifen) ovaries were compared to adult wildtype testes using the Affymetrix Mouse Gene 1.0 ST Array. Both experiments (KO/WT P3 and Mutant/WT/Testis Adult were also compared to each other.)

2010-01-01 | GSE16853 | GEO

shotgun LC/MS/MS of L(3)mbt-IP samples using OSCs

Project description:L(3)mbt regulate the transcription of germ-specific genes in somatic cells but the detailed mechanism remains unclear. We performed shotgun LC/MS/MS of L(3)mbt-IP samples and identified a new interactor in OSCs.

2022-08-15 | PXD026945 | Pride

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data