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Tissue-specific gene expression changes in l(3)mbt mutant ovaries [germline]

ABSTRACT: Tissue-specific gene expression changes in l(3)mbt mutant ovaries [germline]

PROVIDER: PRJNA427342 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR6413570_1.fastq.gz	Fastqsanger.gz
	SRR6413570_2.fastq.gz	Fastqsanger.gz
	SRR6413571_1.fastq.gz	Fastqsanger.gz
	SRR6413571_2.fastq.gz	Fastqsanger.gz
	SRR6413572_1.fastq.gz	Fastqsanger.gz

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Similar Datasets

Tissue-specific gene expression changes in l(3)mbt mutant ovaries [germline]

Project description:We performed RNAseq on embryos laid by somatically complemented l(3)mbt mutant germline to gain a genome-wide view of tissue-specific gene expression changes in L(3)mbt-depleted germline.

2018-02-01 | GSE108471 | GEO

Tissue-specific gene expression changes in l(3)mbt mutant ovaries [soma]

Project description:We performed RNAseq on l(3)mbt mutant somatic ovaries to gain a genome-wide view of tissue-specific gene expression changes in L(3)mbt-depleted somatic ovaries.

2018-02-01 | GSE108472 | GEO

Tissue-specific gene expression changes in l(3)mbt mutant ovaries

Project description:Tissue-specific gene expression changes in l(3)mbt mutant ovaries

| PRJNA427340 | ENA

Tissue-specific gene expression changes in l(3)mbt mutant ovaries [soma]

Project description:Tissue-specific gene expression changes in l(3)mbt mutant ovaries [soma]

| PRJNA427341 | ENA

Tissue-specific gene expression changes in l(3)mbt mutant ovaries

Project description:This SuperSeries is composed of the SubSeries listed below.

2018-02-01 | GSE108473 | GEO

Transcriptomic analysis of tudor[1] mutant Drosophila brain and ovaries

Project description:In Drosophila, Tudor protein and its germline partners, Piwi proteins, are expressed in the brain. However, the potential significance of Tudor in neurobiology has not been explored. Here, we test a hypothesis that Tudor is an essential regulator of post-transcriptional gene expression in the brain where it controls levels of certain RNAs required for brain functions. Specifically, transcriptome of tudor mutant brains is compared with that of wild-type brains using next-generation sequencing (RNA-Seq). The hypothesis that Tudor regulates the same genes in both brain and germline is tested by comparing the transcriptomes from tudor mutant brains and ovaries. This research aims at providing innovative outcomes which may reveal exciting commonalities between the germline and brain and may contribute to our understanding of neurodegenerative disorders and the mechanisms of learning and memory.

2020-11-27 | GSE149745 | GEO

Transcriptional profiles of sov mutant ovaries

Project description:Transcriptional profiles of sov mutant ovaries

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Transcriptome of yw fly, L(3)mbt mutant fly and Lint-O mutant fly were performed in triplicate in Drosophila melanogaster

Project description:L(3)mbt regulates the transcription of germ-specific genes in somatic cells but the detailed mechanism remains unclear. We performed ChIP-seq of L(3)mbt and a newly identified interactor in OSCs to elucidate the genome-wide localization. Then we performed RNA-seq of OSCs before and after RNAi treatment of L(3)mbt and its interactors and performed differential expression analysis.

2022-08-14 | GSE205541 | GEO

Cut&Run in Drosophila melanogaster control, mutant and knockdown ovaries

Project description:H3K27me3 profiles using Cleavage under targets and Release using nuclease (Cut&Run) in control and KD Drosophila melanogaster ovaries. We examined the impact on chromatin profiles in Drosophila melanogaster ovaries in which the lid, the Sin3a, the Snr1 or the mod(mdg4) gene have been selectively knocked down by tissue-specific shRNA expression. We additionally explored H3K27me3 and H3K9me3 in control and dhd mutant ovaries either carrying or not a transgene.

2021-12-10 | GSE174250 | GEO

Expression data from Foxl2 wild-type and mutant ovaries and testes

Project description:Foxl2 is a forkhead transcription factor expressed only in the female, but not in the male gonad. We have created mice homozygous mutant for the Foxl2 gene (KO) as well as mice carrying a conditional mutant Foxl2 allele (floxed). The expression profiles of conventional Foxl2 knockout and wildtype ovaries were compared at P3, using the Affy Mouse Genome 430 2.0 Array. Adult wildtype and conditional mutant (Foxl2 floxed x RosaCre-EBD treated with tamoxifen) ovaries were compared to adult wildtype testes using the Affymetrix Mouse Gene 1.0 ST Array. Both experiments (KO/WT P3 and Mutant/WT/Testis Adult were also compared to each other.)

2010-01-01 | GSE16853 | GEO

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