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Comparison of transcriptomic profiles of Pseudomonas protegens H78 and its rpoN-deleted mutant (H78ΔrpoN)

ABSTRACT: Comparison of transcriptomic profiles of Pseudomonas protegens H78 and its rpoN-deleted mutant (H78ΔrpoN)

PROVIDER: PRJNA449460 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR6976823.fastq.gz	Fastqsanger.gz
	SRR6976824.fastq.gz	Fastqsanger.gz
	SRR6976825.fastq.gz	Fastqsanger.gz
	SRR6976826.fastq.gz	Fastqsanger.gz
	SRR6976827.fastq.gz	Fastqsanger.gz

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Comparison of transcriptomic profiles of Pseudomonas protegens H78 and its rpoN-deleted mutant (H78ΔrpoN)

Project description:Transcriptomic profiles of Pseudomonas protegens H78 and its rpoN-deleted mutant (H78ΔrpoN), which were grown to the late exponential phase (OD600 = 4.0 to 5.0) in the KMB media at 28 °C, were assessed by deep sequencing (RNA-seq) on BGISEQ-500 (illumina).

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Comparison of transcriptomic profiles of Pseudomonas protegens H78 and its hfq mutant (H78Δhfq)

Project description:Transcriptomic profiles of Pseudomonas protegens H78 and its hfq mutant, which were grown to the late exponential phase (OD600 = 5.0 to 6.0) in the KMB media at 28 °C, were assessed by deep sequencing (RNA-seq) on Illumina HiSeq 2500.

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Project description:Comparison of transcriptomic profiles of Pseudomonas protegens H78 and its crc-deleted mutant (H78Δcrc)

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Comparison of transcriptomic profiles of Pseudomonas protegens H78 and its hfq mutant (H78Δhfq)

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Project description:E. faecalis, wildtype, rpoN deletion mutant and rpoN complement strains were grown in colony biofilms on a defined medium with glucose. Gene expression differences were recorded.

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