Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Eubacteriaceae

ABSTRACT: Eubacteriaceae Genome sequencing and assembly

PROVIDER: PRJNA509931 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR8316555_1.fastq.gz	Fastqsanger.gz
	SRR8316555_2.fastq.gz	Fastqsanger.gz
	SRR8316556_1.fastq.gz	Fastqsanger.gz
	SRR8316556_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 9

Similar Datasets

Eubacteriaceae bacterium

Project description:Eubacteriaceae bacterium overview

| PRJNA998536 | ENA

Eubacteriaceae bacterium strain:ES2

Project description:Eubacteriaceae bacterium strain:ES2 Genome sequencing

| PRJNA998216 | ENA

Eubacteriaceae bacterium strain:ES3

Project description:Eubacteriaceae bacterium strain:ES3 Genome sequencing

| PRJNA998222 | ENA

Genome sequence of Eubacteriaceae bacterium CHKCI004

Project description:Genome sequence of Eubacteriaceae bacterium CHKCI004

| PRJEB12388 | ENA

Genome sequence of Eubacteriaceae bacterium CHKCI005

Project description:Genome sequence of Eubacteriaceae bacterium CHKCI005

| PRJEB12389 | ENA

A multicenter translational biomarker phase II trial of regorafenib in patients with non-resectable pretreated colorectal cancer.

Project description:Primary objectives: The primary objective is to investigate circulating tumor DNA (ctDNA) via deep sequencing for mutation detection and by whole genome sequencing for copy number analyses before start (baseline) with regorafenib and at defined time points during administration of regorafenib for treatment efficacy in colorectal cancer patients in terms of overall survival (OS). Primary endpoints: circulating tumor DNA (ctDNA) via deep sequencing for mutation detection and by whole genome sequencing for copy number analyses before start (baseline) with regorafenib and at defined time points during administration of regorafenib for treatment efficacy in colorectal cancer patients in terms of overall survival (OS).

| 2533916 | ecrin-mdr-crc

ONT ULK sequencing of a male cape dune mole-rat kidney sample

Project description:One ONT-ULK sequencing run from the kidney of a single male CDMR (Bathyergus suillus) sample used to make the mBatSui1.1.primary genome assembly as an evolutionary comparator to our telomere-to-telomere naked mole-rat genome assembly. Specifically, we assembled a CDMR from a wild-derived sample in South African cape and sequenced in Toronto, Canada, using PacBio HiFi (89 Gb, read N50 = 18 Kb) and ONT-ULK (55 Gb, read N50 = 43 Kb) reads (contig N50 = 33 Mb, Compleasm S = 99%, QV = 71.0). This accession stores the ONT-ULK data for this assembly.

2026-08-05 | E-MTAB-17420 | biostudies-arrayexpress

Pacbio Hifi sequencing of a male cape dune mole-rat kidney sample

Project description:One PacBio Hifi sequencing run from the kidney of a single male CDMR (Bathyergus suillus) sample used to make the mBatSui1.1.primary genome assembly as an evolutionary comparator to our telomere-to-telomere naked mole-rat genome assembly. Specifically, we assembled a CDMR from a wild-derived sample in South African cape and sequenced in Toronto, Canada, using PacBio HiFi (89 Gb, read N50 = 18 Kb) and ONT-ULK (55 Gb, read N50 = 43 Kb) reads (contig N50 = 33 Mb, Compleasm S = 99%, QV = 71.0). This accession stores the Pacbio Hifi data for this assembly.

2026-08-05 | E-MTAB-17312 | biostudies-arrayexpress

Pacbio Hifi sequencing of a naked mole-rat male subordinate kidney sample

Project description:Two PacBio Hifi sequencing runs from the kidney of a single male NMR sample used to make the mHetGla4.1.primary genome assembly. Specifically, we assembled a second NMR genome from an unrelated male of a separate captive colony in Toronto, Canada, using PacBio HiFi (155.8 Gb, read N50 = 11.45 Kb) and ONT-LSK (299.6 Gb, read N50 = 10.1 Kb) reads (contig N50 = 75.7 Mb, Compleasm S = 98%). This accession stores the Pacbio Hifi data for this independent assembly.

2026-08-05 | E-MTAB-17313 | biostudies-arrayexpress

ONT R10.4-Lsk sequencing of a naked mole-rat male subordinate. Sheared kidney, unsheared kidney, and brain samples

2026-08-06 | E-MTAB-17334 | biostudies-arrayexpress