Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Tracheal aspirate bulk RNA sequencing from patients with ARDS [bulk RNA-seq]

ABSTRACT: Tracheal aspirate bulk RNA sequencing from patients with ARDS [bulk RNA-seq]

PROVIDER: PRJNA826911 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Tracheal aspirate bulk and single cell RNA sequencing from patients with ARDS

Project description:Tracheal aspirate bulk and single cell RNA sequencing from patients with ARDS

| PRJNA826907 | ENA

Tracheal aspirate RNA sequencing identifies distinct immunological features of COVID-19 ARDS

Project description:We compared differential gene expression in tracheal aspirates collected mechanically ventilated subjects with COVID-19 ARDS to gene expression in tracheal aspirates from: 1) subjects with ARDS from other casues and 2) mechanically ventilated controls without evidence of pulmonary disease.

2020-12-18 | GSE163426 | GEO

Tracheal aspirate RNA sequencing identifies distinct immunological features of COVID-19 ARDS

Project description:Tracheal aspirate RNA sequencing identifies distinct immunological features of COVID-19 ARDS

| PRJNA686091 | ENA

Tracheal aspirate single cell RNA sequencing from patients with ARDS [scRNA-seq]

Project description:Tracheal aspirate single cell RNA sequencing from patients with ARDS [scRNA-seq]

| PRJNA826910 | ENA

Tracheal aspirate bulk RNA sequencing from patients with ARDS [bulk RNA-seq]

Project description:Trachel aspirates samples were collected from an observational cohort of mechanically ventilated patients to compare respiratory tract gene expression in previous-descried ARDS molecular phenotypes. Patient charts were reviewed by two physicians and patients with ARDS were identified using the Berlin Definition. Control subjects were mechanically ventilated for neurologic indications, were not immunosuppressed, and had no evidence of pulmonary disease. ARDS molecular phenotypes were defined using a previously-described 3-variable classifier (Sinha 2020)

2025-04-14 | GSE200847 | GEO

Tracheal aspirate single cell RNA sequencing from patients with ARDS [scRNA-seq]

Project description:Trachel aspirates samples were collected from an observational cohort of mechanically ventilated patients to compare respiratory tract gene expression in previous-descried ARDS molecular phenotypes. Patient charts were reviewed by two physicians and patients with ARDS were identified using the Berlin Definition. ARDS molecular phenotypes were defined using a previously-described 3-variable classifier (Sinha 2020)

2025-04-14 | GSE200848 | GEO

mTOR Inhibition Enables Long-Term Expansion of Human Neonatal Tracheal Aspirate-Derived Airway Basal Stem Cells

Project description:Bronchopulmonary dysplasia remains one of the most common complication of prematurity, despite significant improvements in perinatal care. Functional modeling of human lung development and disease, like BPD, is limited by our ability to access the lung and to maintain relevant stem cell populations in culture. Single cell RNA-sequencing confirmed the presence of epithelial cells in tracheal aspirates obtained from intubated neonates. Using combined SMAD signaling inhibition and mTOR inhibition neonatal tracheal-aspirate derived (nTAD) basal stem cells can be expanded long-term and retain the ability to differentiate into pseudo-stratified airway epithelium. Conclusions: Our data demonstrate that neonatal tracheal aspirate-derived epithelial cells can provide a novel ex vivo human cellular model to study neonatal lung development and disease.

2020-04-15 | GSE137353 | GEO

mTOR Inhibition Enables Long-Term Expansion of Human Neonatal Tracheal Aspirate-Derived Airway Basal Stem Cells

2020-09-21 | GSE137950 | GEO

Acinetobacter baumannii strain:010 | isolate:tracheal aspirate

Project description:Acinetobacter baumannii strain:010 | isolate:tracheal aspirate Genome sequencing

| PRJNA1415282 | ENA

Acinetobacter baumannii strain:012 | isolate:tracheal aspirate

Project description:Acinetobacter baumannii strain:012 | isolate:tracheal aspirate Genome sequencing

| PRJNA1415305 | ENA