Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Venom-gland transcriptomics of the Malayan Pit Viper (Calloselasma rhodostoma) for identification, classification, and characterization of venom proteins

PROVIDER: PRJNA949833 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR24000774_1.fastq.gz	Fastqsanger.gz
	SRR24000774_2.fastq.gz	Fastqsanger.gz
	SRR24000775_1.fastq.gz	Fastqsanger.gz
	SRR24000775_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 4 of 4

Similar Datasets

Proteomics of venom from Trimeresurus malabaricus

Project description:This project mainly aims to characterize the complex toxic components present in the venom of Trimeresurus malabaricus (Malabar pit viper). Since Trimeresurus malabaricus (Malabar pit viper) species are mainly inhabited to plantation crop areas, its envenomation is a serious threat to the human population thriving in these zones, especially to the plantation workers. Therefore, exploring the venom proteome of Malabar pit viper is decisive to develop and design new antivenom and therapeutics against its envenomation. As described in this study, applying various orthogonal separation strategies helped in dissecting venom constituents of Trimeresurus malabaricus and is the first comprehensive attempt in revealing the complex venom profile of Malabar pit viper through proteomics approaches incorporating multiple database searches. In order to achieve this the crude venom components were resolved on a 12% SDS page. Further each of the bands were subjected to in-gel trypsin digestion. The crude venom was also subjected to ion-exchange chromatography separation. The obtained fractions were subjected to in-solution trypsin digestion. All the digested peptides were then subjected to Q-TOF LC-MS/MS analysis.

2020-01-24 | PXD011673 | Pride

Unveiling the venom proteome of Pope's Pit Viper (Trimeresusrus popeiorum)

Project description:Trimeresurus popeiorum, more popularly known as Pope's Pit Viper, is among the venomous Indian snakes that do not belong to the "Big Four" snake species. The project aims to unveil the venom proteome of Pope's Pit Viper (Trimeresusrus popeiorum) from northeastern India.

2025-03-19 | PXD057471 | Pride

Calloselasma rhodostoma

Project description:Calloselasma rhodostoma overview

| PRJNA1257493 | ENA

Project description:Malaysian Wagler's Pit Viper (Tropidolaemus wagleri) venom-gland transcriptome raw sequence reads (SRA)

| PRJNA997256 | ENA

Calloselasma rhodostoma

Project description:Calloselasma rhodostoma Raw sequence reads

| PRJNA549256 | ENA

Project description:short read WGS of Calloselasma rhodostoma

| PRJNA1008250 | ENA

Calloselasma rhodostoma

Project description:Calloselasma rhodostoma Genome sequencing and assembly

| PRJNA1145289 | ENA

Proteomics of Hypnale hypnale (Hump-nosed pit viper) venom from the Western Ghats of India

Project description:Hypnale hypnale (hump-nosed pit viper) is considered to be one among the medically important venomous snake species of India and Sri Lanka. In the present study, venom proteome profiling of a single Hypnale hypnale from Western Ghats of India was achieved using SDS-PAGE based protein separation followed by LC-MS/MS analysis

2020-03-19 | PXD017592 | Pride

Venomics of the horned desert Viper (Cerastes Cerastes) and the mangrove pit viper (Cryptelytrops purpureomaculatus)

Project description:In this study two Viperidae species, living in two different habitats, the horned desert viper (Cerastes cerastes) native to the deserts in North Africa and in turn the mangrove pit viper (Cryptelytrops purpureomaculatus), which can be found in South/Southeast Asia, were studied in terms of the identification of the venom proteome.

2018-08-07 | MSV000082753 | MassIVE

Project description:Transcriptome of Shedao pit-viper and black eyebrow pit-viper

| PRJNA507957 | ENA