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MetabolomicsWhat CHO is made of: Variations in the biomass composition of Chinese hamster ovary cell lines

Background: Cell line specific, genome-scale metabolic models enable rigorous and systematic in silico investigation of cellular metabolism. Such models have recently become available for Chinese hamster ovary (CHO) too. However, a key ingredient, namely an experimentally validat...

2020-07-13 | MTBLS1210 | MetaboLights
TranscriptomicsEvolutionary engineering of Saccharomyces cerevisiae for enhanced tolerance to hydrolysates of lignocellulosic biomass Samples vs Reference
Adaptive evolution experiment for enhaced tolerance to hydrolysates of lignocellulosic biomass in S. cerevisiae. The samples involves a batch culture in YNB and Hydrolysates. Cells were harvested at mid-exponential phase. Three biological replicas of 8 samples vs reference Samples 1-8 are the first...
ORGANISM(S): Saccharomyces cerevisiae 
2013-04-26 | E-GEOD-44085 | biostudies-arrayexpress
TranscriptomicsEvolutionary engineering of Saccharomyces cerevisiae for enhanced tolerance to hydrolysates of lignocellulosic biomass Samples vs Reference
Adaptive evolution experiment for enhaced tolerance to hydrolysates of lignocellulosic biomass in S. cerevisiae. The samples involves a batch culture in YNB and Hydrolysates. Cells were harvested at mid-exponential phase.
ORGANISM(S): Saccharomyces cerevisiae 
2013-04-26 | GSE44085 | GEO
ProteomicsEngineering Corynebacterium glutamicum to produce the biogasoline isopentenol from plant biomass hydrolysates
Background. Many microbial hosts used for the rapid discovery and development of metabolic pathways can have sensitivities to final products and process reagents. Isopentenol, a biogasoline candidate, has an established heterologous gene pathway but is toxic to many microbial hosts. Reagents used in...
ORGANISM(S): Corynebacterium Glutamicum Atcc 13032 
PXD012293 | panorama
ProteomicsProteomes of Robust Yarrowia lipolytica Isolates Cultivated in Biomass Hydrolysate Reveal Key Processes Impacting Sugar Utilization and Lipid Degradation
Proteomes of Robust Yarrowia lipolytica Isolates Cultivated in Biomass Hydrolysate Reveal Key Processes Impacting Sugar Utilization and Lipid Degradation
ORGANISM(S): Yarrowia Lipolytica (ncbitaxon:4952) 
2020-08-11 | MSV000085941 | MassIVE
UnknownEngineering the Oleaginous Yeast Rhodosporidium toruloides for Improved Resistance Against Inhibitors in Biomass Hydrolysates.
Not available
S-EPMC8634367 | biostudies-literature
UnknownCultivation of lipid-producing bacteria with lignocellulosic biomass: effects of inhibitory compounds of lignocellulosic hydrolysates.
Not available
S-EPMC7702278 | biostudies-literature
UnknownDraft Genome Sequence of Coniochaeta ligniaria NRRL 30616, a Lignocellulolytic Fungus for Bioabatement of Inhibitors in Plant Biomass Hydrolysates.
Not available
S-EPMC5270693 | biostudies-literature
ProteomicsMethyl ketone production by Pseudomonas putida is enhanced by plant-derived amino acids
Methyl ketone production by P. putida with A. thaliana and switchgrass hydrolysates obtained by dilute acid pretreatment led to the identification of plant-derived amino acids, rather than mono-aromatics, as key stimulative components of these hydrolysates. Shotgun proteomics indicated that the amin...
ORGANISM(S): Pseudomonas putida KT2440 
2019-06-27 | PXD012013 | Pride
Lignin-related aromatics  methyl ketones  biomass hydrolysates  protein  amino acids. 
UnknownEngineering Corynebacterium glutamicum to produce the biogasoline isopentenol from plant biomass hydrolysates.
Not available
S-EPMC6391826 | biostudies-literature
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