continuous cultivation

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Organisms

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Organisms

soil metagenome (15)
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bioreactor metagenome (7)
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Saccharomyces cerevisiae (5)
Escherichia coli (4)
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Dinoroseobacter shibae DFL 12 = DSM 16493 (2)
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Oenococcus oeni AWRIB429 (1)
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Roseobacter denitrificans OCh 114 (1)
Methylotuvimicrobium buryatense (1)
Escherichia coli str. K-12 substr. W3110 (1)
ammonia-oxidizing enrichment culture (1)
Bombycidae (1)
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Auxenochlorella protothecoides (1)
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Escherichia coli str. K-12 substr. MG1655 (1)
Aspergillus nidulans FGSC A4 (1)
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methane-oxidizing enrichment culture (1)
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Technology Type

Mass Spectrometry (33)
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Instrument Platform

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Liquid Chromatography MS - negative - reverse phase (1)

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2005 (1)

CHEBI ID

CHEBI:32816 (5)
CHEBI:17234 (4)
CHEBI:28842 (4)
CHEBI:16704 (4)
CHEBI:18012 (4)
CHEBI:16027 (4)
CHEBI:30915 (4)
CHEBI:26078 (4)
CHEBI:15756 (4)
CHEBI:30813 (3)
CHEBI:17992 (3)
CHEBI:30805 (3)
CHEBI:16264 (3)
CHEBI:15721 (3)
CHEBI:18237 (3)
CHEBI:48153 (3)
CHEBI:48928 (3)
CHEBI:17533 (3)
CHEBI:16708 (3)
CHEBI:16988 (3)
CHEBI:25017 (3)
CHEBI:28875 (3)
CHEBI:15428 (3)
CHEBI:17754 (3)
CHEBI:40480 (1)
CHEBI:16236 (1)
CHEBI:15343 (1)
CHEBI:15361 (1)
CHEBI:16908 (1)
CHEBI:16526 (1)

Metabolite Name

Hydroxymethylbilane (3)
Sedoheptulose 7-phosphate (3)
Dethiobiotin (3)
Inosine (3)
N-Succinyl-2-L-amino-6-oxoheptanedioate (2)
N-Succinyl-LL-2,6-diaminoheptanedioate (2)
Sn-Glycero-3-phospho-1-inositol (2)
Arbutin 6-phosphate (2)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (2)
Protoporphyrin (2)
Alpha,alpha'-Trehalose 6-phosphate (2)
Phosphoenolpyruvic acid (2)
Phenolphthalin (2)
6-Phospho-D-gluconate (2)
Trehalose (2)
Pyruvic acid (2)
Amylopectin (2)
Pantetheine 4'-phosphate (2)
Aerobactin (2)
Glycogen (2)
Minocycline (2)
Flavin Mononucleotide (2)
Sn-Glycero-3-phosphocholine (2)
N-Acetyl-D-glucosamine (2)
2,3,4,5-Tetrahydrodipicolinate (2)
Uridine (2)
AMP (2)
N-Acetyl-L-glutamate (2)
Glycine (2)
Glycerol (2)

IsPrivate

False (1)

First Public Date

2025 (36)
2026 (34)
2024 (28)
2014 (28)
2023 (22)
2022 (13)
2021 (13)
2019 (8)
2020 (5)
2018 (3)
2017 (3)
2016 (3)
2013 (3)
2015 (1)

Classification

bacteria (9)
fungi (2)
viruses (1)

Modelling Approach

Ordinary differential equation model (1)

Study type

Transcription profiling by array (74)
RNA-seq of coding RNA (12)
Unknown experiment type (1)
Comparative genomic hybridization by array (1)
Other (1)
Methylation profiling by array (1)

Release Date

2025 (107)
2023 (77)
2022 (74)
2024 (67)
2021 (56)
2020 (51)
2019 (46)
2014 (24)
2018 (20)
2016 (19)
2008 (19)
2010 (15)
2012 (14)
2011 (14)
2017 (13)
2013 (12)
2015 (11)
2009 (7)
2026 (7)
2007 (5)
2006 (3)
2005 (2)
2001 (1)
1999 (1)

Lab affiliation

State Key Laboratory for Development and Utilization of Forest Food Resources, Co-Innovation Center for Sustainable Forestry in Southern China, State Key Laboratory of Tree Genetics and Breeding, Key Laboratory of State Forestry and Grassland Administration on Subtropical Forest Biodiversity Conservation, College of Life Sciences, Nanjing Forestry University, Nanjing, Jiangsu, 210037, China (2)
Novo Nordisk Foundation Center for Biosustainability (2)
Science for Life Laboratory, School of Biotechnology, KTH – Royal Institute of Technology, Stockholm, Sweden. (1)
Beijing Key Lab of Bioprocess, National Energy R&D Center for Biorefinery, College of Life Science and Technology, Beijing University of Chemical Technology, Beijing 100029, PR China (1)
Molecular Proteomics Laboratory (MPL) Biologisch-Medizinisches Forschungszentrum (BMFZ) Heinrich-Heine-Universität Düsseldorf Universitätsstraße 1 40225 Düsseldorf (1)
State Key Laboratory of Materials-Oriented Chemical Engineering, College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing, 211816, P.R. China; (1)
Uni Greifswald Hausdorffstrasse 8 17489 Greifswald (1)
Laboratório de Química e Função de Proteínas e Peptídeos, Centro de Biociências e Biotecnologia (CBB), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Av. Alberto Lamego, Campos dos Goytacazes, RJ, Brazil. (1)
Helmholtz Centre for Environmental Research GmbH - UFZ Department of Molecular Systems Biology Permoserstra��e 15, 04318 Leipzig, Germany Phone +49 341 235 4767 nico.jehmlich@ufz.de, www.ufz.de (1)
Helmholtz-Centrte for Environmental Research - UFZ GmbH Department of Molecular Systems Biology Permoserstr. 15 04318 Leipzig, Germany (1)
School of Design, Shanghai Jiao Tong University, Shanghai 200240, China (1)
Department of Plant Protection, Shenyang Agricultural University (1)
Department of Biology, Dalhousie University, Halifax Nova Scotia Canada B3H-4R2 (1)
Jiaxing University Master Degree Cultivation Base, Zhejiang Chinese Medical University, Hangzhou, China (1)
ERA Chair in Gas Fermentation Technologies, Institute of Technology, University of Tartu (1)
Embrapa Agrobiologia, Seropédica-RJ, Brazil. (1)
Competence Center of Food and Fermentation Technology (1)
Forschungszentrum Juelich GmbH Institute of Bio- and Geosciences: Biotechnology 2 Wilhelm-Johnen-Str. 52425 Juelich Germany (1)
Project Group Leader Dept. of Proteomics and Signal Transduction Max Planck Institute of Biochemistry (1)
Prof. Dr. Hans-Peter Braun Abteilung Pflanzenproteomik Institut für Pflanzengenetik Naturwissenschaftliche Fakultät Leibniz Universität Hannover Herrenhäuser Str. 2 30419 Hannover Germany (1)
Key Laboratory of Medicinal Plant Biology of Yunnan Province, Yunnan Agricultural University, Kunming 650201, China (1)
Institute of Microbiology, University of Greifswald, Felix-Hausdorff-Str. 8, 17489 Greifswald, Germany (1)
Helmholtz-Zentrum für Umweltforschung, Department of Molecular Systems Biology (1)
ERA Chair in Gas Fermentation Technologies, Institute of Technology, University of Tartu, Tartu, Estonia (1)
Helmholtz Centre for Environmental Research GmbH - UFZ Department of Molecular Systems Biology Permoserstraße 15 04318 Leipzig, Germany (1)
Dept. of Proteomics and Signal Transduction Max Planck Institute of Biochemistry (1)
Helmholtz Centre for Environmental Research GmbH - UFZ Department of Molecular Systems Biology Permoserstraße 15, 04318 Leipzig, Germany Phone +49 341 235 4767 (1)
Erciyes University, Genome and Stem Cell Center, Kayseri,TURKEY (1)
Wageningen University (1)
Mass Spectrometry Laboratory, Institute of Biochemistry and Biophysics, Polish Academy of Sciences, Warsaw, Poland (1)

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Short-chain fatty acid (SCFA) analysis of DSS-treated murine intestinal microbiota using continuous cultivation in bioreactors

Not available

ORGANISM(S): Mus musculus

ST002394 | MetabolomicsWorkbench

Long-term continuous cultivation of Kenyan infant fecal microbiota using the host adapted PolyFermS model

Kenyan infant fecal microbiota continuous cultivation

PRJEB63090 | ENA

Soil Microbiota- Continuous Cultivation of Ganoderma Leucocontextum

PRJNA941117 | ENA

Soil microorganisms in continuous cultivation of Gastrodia elata

PRJNA1310732 | ENA

greenhouse morel-cultivation soil microbiome

greenhouse morel-cultivation soil microbiome Raw sequence reads

PRJNA1521592 | ENA

Photonic-chemostat engineering for efficient continuous cultivation of cyanobacteria.

Not available

S-EPMC12933868 | biostudies-literature

Soil of Ganoderma lucidum in log-cultivation

Microbial sequences in soil of Ganoderma lucidum during log-cultivation Metagenome

PRJNA930585 | ENA

Airlift bioreactor-based strategies for prolonged semi-continuous cultivation of edible Agaricomycetes.

Not available

S-EPMC11189342 | biostudies-literature

ammonia-oxidizing enrichment culture

Metagenomics of long-term continuous cultivation for thermophiles

PRJDB6348 | ENA

A closer look at Aspergillus: Online monitoring via scattered light enables reproducible phenotyping

Development of microtiter plate based microbioreactor cultivation for Aspergillus giganteus with quasi-continuous online measurements. Different parameters such as well geometry, shaking frequency and morphology controlling agents were investigated in order to optimize the microtiter plate cultivati...

ORGANISM(S): Aspergillus giganteus

2019-08-12 | PXD013751 | Pride

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