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TranscriptomicsGastric Cancer Subtyping (Australian Patient Cohort)
Genome-wide mRNA expression profiles of 70 primary gastric tumors from the Australian patient cohort. Like many cancers, gastric adenocarcinomas (gastric cancers) show considerable heterogeneity between patients. Thus, there is intense interest in using gene expression profiles to discover subtypes ...
ORGANISM(S): Homo sapiens 
2012-07-04 | E-GEOD-35809 | biostudies-arrayexpress
ProteomicsSecretomes of Cancer-Associated Myofibroblasts and Normal Tissue Myofibroblasts in hypoxia and normoxia C4PR_LIV
Cancer-associated fibroblasts are a major component of the cancer stroma. Here we focus on gastric cancer associated myofibroblasts (CAMs). CAMs secrete factors that increase the migration, invasion and proliferation of cancer cells when compared to adjacent tissue myofibroblasts (ATMs), or normal t...
ORGANISM(S): Homo sapiens (Human) 
2019-03-04 | PXD008104 | Pride
Gastric cancer Tumour microenvironment Protein secretion 
ProteomicsHuman gastric extracellular matrix hydrogels maintain organoid growth and reduce gene expression associated with stemness and inflammation
Human gastric organoids (HGOs) are 3-D cultures of primary gastric epithelial cells that serve as in vitro models for gastric epithelial physiology, development, and disease. The extracellular matrix material that organoids are maintained in provides crucial signals to the epithelial cells, regulat...
ORGANISM(S): Homo sapiens (Human) 
2026-07-29 | PXD081816 | Pride
Decellularized tissue  gastric stroma  hydrogel  extracellular matrix 
GenomicsNext Generation Sequencing Facilitates Quantitative Analysis of Transcriptomes for advanced gastric cancer with different tumour-stroma-scores
Next Generation Sequencing Facilitates Quantitative Analysis of Transcriptomes for advanced gastric cancer with different tumour-stroma-scores
PRJNA743008 | ENA
UnknownTumour-stroma ratio and prognosis in gastric adenocarcinoma.
Not available
S-EPMC6133938 | biostudies-literature
TranscriptomicsNext Generation Sequencing Facilitates Quantitative Analysis of Transcriptomes for advanced gastric cancer with different tumour-stroma-scores
Gastric cancer is one of the leading causes of cancer mortality worldwide. We compared transcriptomic profiles of advanced gastric cancer with different tumour-stroma-scores to identify the prognostic significance of tumour-stroma-score in advanced gastric cancer.
ORGANISM(S): Homo sapiens 
2021-11-29 | GSE179252 | GEO
ProteomicsProteomic analysis of gastric cancero patient-derived tissue ECM
Gastric cancer (GC) is a highly heterogeneous disease regarding histologic features, genotypes, and molecular phenotypes. Here, we investigated extracellular matrix (ECM)-centric analysis, examining its association with histologic subtypes and patient prognosis in human gastric cancer. We performed ...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2024-01-12 | MSV000093859 | MassIVE
GenomicsRNA sequencing of stroma from good (survival) and bad (lethality) outcome gastric cancer patients is enough to separate patients based on outcome.
RNA sequencing of stroma from good (survival) and bad (lethality) outcome gastric cancer patients is enough to separate patients based on outcome.
PRJNA693557 | ENA
TranscriptomicsTranscription profiling by array of human stromal cells cultured with or without 3D BPH-1 prostate epithelial cells
BPH-1 prostate epithelial cells when cultured in Matrigel form 3D acini which closely recapitulate the tissue architecture of the prostate. The presence of primary stroma increases epithelial adhesions and causes changes in morphology. To identify the stromal signals which control actin/cadherin dy...
ORGANISM(S): Homo sapiens 
2010-06-09 | E-MEXP-2657 | biostudies-arrayexpress
ProteomicsHuman gastric extracellular matrix hydrogels maintain organoid growth and reduce gene expression associated with epithelial-mesenchymal transition and inflammation
Human gastric organoids (HGOs) are 3-D cultures of primary gastric epithelial cells that serve as in vitro models for gastric epithelial physiology, development, and disease. The extracellular matrix material that organoids are maintained in provides crucial signals to the epithelial cells, regulat...
ORGANISM(S): Homo sapiens (Human) 
2026-09-14 | PXD066286 | Pride
Decellularized tissue  gastric stroma  hydrogel  extracellular matrix 
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