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Unknown (3178)
Genomics (1429)
Proteomics (53)
Transcriptomics (7)
Metabolomics (2)
Other (1)

Organisms

Aerococcus urinae NBRC 15544 = CCUG 36881 (50)
Allexis (50)
Arabidopsis thaliana (50)
Canis lupus familiaris (50)
Carya cathayensis (50)
Clostridioides difficile 630 (50)
Cyanophora paradoxa (50)
Ensifer adhaerens (50)
Enterococcus faecalis (50)
Globicatella sanguinis (50)
Histomonas meleagridis (50)
Human immunodeficiency virus 1 (50)
Leishmania major strain Friedlin (50)
Listeria monocytogenes (50)
Homo sapiens (3)
Staphylococcus epidermidis (2)
Mus musculus (2)
Holotrichia serrata (2)
Musa acuminata subsp. burmannicoides (1)
Cajanus cajan (1)
Ananas comosus (1)
Mangifera indica (1)
Psidium guajava (1)
Bos grunniens (1)
Lactuca sativa (1)
Bos taurus (1)
Heterorhabditis (1)
Photorhabdus luminescens (1)
Spodoptera frugiperda (1)
Steinernema feltiae (1)

Organisms

Oryza sativa (34)
soil metagenome (26)
Triticum aestivum (22)
Listeria monocytogenes (21)
Solanum tuberosum (18)
Staphylococcus aureus (16)
Escherichia coli (15)
Labeo rohita (13)
Bacillus thuringiensis (12)
Mangifera indica (11)
Severe acute respiratory syndrome coronavirus 2 (10)
Sus scrofa (10)
Pasteurella multocida subsp. multocida (9)
Bubalus bubalis (9)
plant metagenome (9)
gut metagenome (9)
Gallus gallus (9)
Clarias magur (8)
Bacillus subtilis (8)
Homo sapiens (8)
Punica granatum (7)
Anabas testudineus (7)
metagenome (7)
Pasteurella multocida (6)
Bos indicus (6)
Salmonella enterica subsp. enterica serovar Typhimurium (5)
Heterorhabditis indica (5)
Cicer arietinum (5)
Allium cepa (5)
seed metagenome (5)

Repository

ENA (1422)
pride (50)
geo (8)
EVA (6)
jPOST (3)
MetaboLights (2)
biostudies-arrayexpress (1)

Tissue

Blood serum (11)
Blood cell (9)
Muscle (5)
Cell culture (4)
Muscle tissue (4)
Leaf (3)
Epithelial cell (2)
Liver (2)
Milk (2)
Plant cell (2)
Urine (2)
Whole body (2)
Bladder organ (1)
Blood plasma (1)
Eye (1)
Fibroblast (1)
Hepatocyte (1)
Kidney (1)
Lung (1)
Monocyte (1)
Muscle cell proliferation (1)
Mycelium (1)
Parvalbumin alpha (1)
Semen (1)
Serum (1)
Skeletal muscle satellite cell (1)
Somatic cell (1)
Stalk cell (1)
Swim bladder (1)

Disease

Disease free (2)
Avian influenza (1)
Japanese encephalitis (1)
Liver disease (1)
Mastitis (1)

Technology Type

Mass Spectrometry (50)
Shotgun proteomics (29)
Bottom-up proteomics (10)
Gel-based experiment (7)
Top-down proteomics (6)
Data-dependent acquisition (4)
Mass spectrometry (2)
Proteogenomics (1)
SWATH MS (1)

Instrument Platform

Illumina NovaSeq 6000 (3)
Illumina HiSeq 2000 (2)
Illumina HiSeq X Ten (1)
Liquid Chromatography MS - alternating - direct infusion (1)
Liquid Chromatography MS - positive - reverse phase (1)
Liquid Chromatography MS - negative - reverse phase (1)

Publication Date

2025 (27)
2026 (9)
2023 (8)
2024 (6)
2020 (5)
2022 (3)
2018 (3)
2021 (3)
2014 (2)
2016 (2)
2019 (1)
2017 (1)

CHEBI ID

CHEBI:82564 (2)
CHEBI:31448 (2)
CHEBI:80322 (2)
CHEBI:347401 (2)
CHEBI:90003 (2)
CHEBI:28726 (2)
CHEBI:89302 (2)
CHEBI:80610 (2)
CHEBI:16645 (2)
CHEBI:16690 (2)
CHEBI:88834 (2)
CHEBI:6900 (2)
CHEBI:137225 (2)
CHEBI:89919 (2)
CHEBI:52968 (2)
CHEBI:28850 (2)
CHEBI:89519 (2)
CHEBI:3112 (2)
CHEBI:16322 (2)
CHEBI:41977 (2)
CHEBI:86251 (2)
CHEBI:28803 (2)
CHEBI:17422 (2)
CHEBI:135954 (2)
CHEBI:39264 (2)
CHEBI:48289 (2)
CHEBI:55344 (2)
CHEBI:88408 (2)
CHEBI:64174 (2)
CHEBI:143298 (2)

Metabolite Name

Cer(D18:0/24:0) (2)
Levomethadyl acetate (2)
Adrenorphin (2)
Beta-D-Glucosyl-N-(oleoyl)sphingosine (2)
3-Oxotetradecanoyl-CoA (2)
[4-hydroxy-2-({[hydroxy({[hydroxy({[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy})phosphoryl]oxy})phosphoryl]oxy}methyl)-5-(4-hydroxy-2-oxo-1,2-dihydropyrimidin-1-yl)oxolan-3-yl]oxidanesulfonic acid (2)
PC(O-18:0/20:0) (2)
Guanosine 3'-diphosphate 5'-triphosphate (2)
Harman (2)
Metocurine (2)
PE(14:0/15:0) (2)
PC(O-18:0/22:0) (2)
Pyridoxine 5'-phosphate (2)
Guanosine 3',5'-bis(diphosphate) (2)
Metrizamide (2)
Acarbose (2)
Lactyl-CoA (2)
Acrylyl-CoA (2)
Diguanosine tetraphosphate (2)
Deoxyuridine triphosphate (2)
Tricosane (2)
Iopentol (2)
1,3,5-Trithiane (2)
3H-1,2-Dithiole-3-thione (2)
Iohexol (2)
Itraconazole (2)
Butyryl-CoA (2)
2-Hydroxyestradiol-3-methyl ether (2)
Iopromide (2)
Cefmenoxime (2)

First Public Date

2026 (244)
2024 (215)
2025 (177)
2023 (175)
2022 (115)
2021 (115)
2019 (106)
2020 (93)
2018 (67)
2017 (49)
2016 (43)
2015 (13)
2014 (8)
2013 (2)

Classification

bacteria (119)
viruses (24)
fungi (5)

Study type

Transcription profiling by array (1)

Release Date

2022 (528)
2023 (478)
2021 (431)
2025 (376)
2024 (329)
2020 (289)
2019 (187)
2018 (187)
2017 (145)
2016 (94)
2015 (45)
2026 (35)
2014 (16)
2013 (12)
2012 (10)
2011 (3)
2010 (2)
2009 (2)
2008 (2)
2007 (2)
2006 (1)
2005 (1)
2004 (1)
2002 (1)
2001 (1)

Lab affiliation

Molecular Biology and Biotechnology Division, ICAR-National Bureau of Fish Genetic Resources, Lucknow, Uttar Pradesh 226002, India (8)
Director ICAR - Central Inland Fisheries Research Institute Manirampore, Barrackpore, Kolkata 700120 (4)
Director CIFRI (3)
Director Cifri (3)
Central Lab for Proteomics and Transcriptomics, Crop Improvement Division, ICAR-Indian Institite of Sugarcane Research, Lucknow, India 226002 (1)
Central Lab for Proteomics and Transcriptomics, Crop Improvement Division, ICAR-Indian Institute of Sugarcane Research, Lucknow, India 226002 (1)
Department of Biomedical Sciences, University of Padova, Italy (1)
Dr Rakesh Kumar Principal Scientist, Animal Biotechnology, ICAR-National Dairy Research Institute, Karnal, Haryana, India (1)
Dr. A. Manivannan,Senior Scientist, ICAR- Central Institute for Cotton Research, Regional Station, Coimbatore-641003, Tamil Nadu, India (1)
ICAR- Central Inland Fisheries Research Institute, Fishery Resource and Environmental Management Division, Biochemistry Laboratory, Proteomics Unit, Barrackpore- 700120. Ph- +919230618153 (1)
ICAR- National Bureau of Agriculturally Important Microorganisms, Kushmaur, Maunath Bhanjan, Mau, Uttar Pradesh, INDIA (1)
ICAR-CIFE Mumbai 400061 (1)
ICAR-CIFE, Mumbai (1)
ICAR-CIFE, Mumbai-400061 (1)
ICAR-Central Inland Fisheries Research Institute, Barrackpore, Kolkata-700120, India (1)
ICAR-Central Inland Fisheries Research Institute, Fishery Resourse & Environmental Management Division, Biochemistry Lab-1, Proteomics Unit, Barrackpore, Kolkata, India (1)
ICAR-Central Institute for Research on Goats, Makhdoom, Farah, Mathura-281122 (1)
ICAR-NRCPB, LBS Centre, Pusa Campus, IN-110012 New Delhi (1)
ICAR-NRCPB, LBS Centre, Pusa Campus, IN-110012 New Delhi (1)
ICAR-National Bureau of Agriculturally Important Microorganisms, Kushmaur, Maunath Bhanjan, Mau-274103, Uttar Pradesh, INDIA (1)
ICAR-National Bureau of Animal Genetic Resources, Karnal (1)
ICAR-National Institute for Plant Biotechnology, Pusa Campus, New Delhi, India -110012 (1)
ICAR-National Rice Research Institute, Cuttack-753006 (1)
Indian Council of Agricultural Research (1)
Lab no. 54, Division of Genetics, ICAR-Indian Agricultural Research Institute (1)
M.V.Sc., PG Diploma in IPR, Master of IP Law, Ph.D, ARS Head, Southern Campus of ICAR-National Dairy Research Institute, Adugodi, Bangalore, India, 560030 (1)
MOE Key Laboratory of Tumor Molecular Biology and Key Laboratory of Functional Protein Research of Guangdong Higher Education Institutes, Institute of Life and Health Engineering, College of Life Science and Technology, Jinan University, Guangzhou, China (1)
National Dairy Research Institute (1)
National Dairy Research Institute, Animal Biotechnology Center, Karnal, Haryana, 132001 (1)
National Dairy Research institute (1)

Tags

pathogen (148)
pathogen:bacterium (119)
pathogen:virus (24)
covid19 (10)
pathogen:fungus (5)

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Goniozus nephantidis cultivar:ICAR-NBAIR

Goniozus nephantidis cultivar:ICAR-NBAIR Genome sequencing

PRJNA1253398 | ENA

Metaproteomic data of maize rhizosphere

We present metaproteome data from maize rhizosphere from sodic soil. Isolation of proteome from maize rhizosphere collected from Experimental Farm, ICAR-IISS, Mau, India was done with the standardized protocol at our laboratory and metaproteome analysis was done with the standardized pipepline. In ...

ORGANISM(S): rhizosphere soil bacteria ensemble

2019-10-08 | PXD014519 | Pride

Argulus siamensis isolate:ICAR-CIFA

Argulus siamensis isolate:ICAR-CIFA Transcriptome or Gene expression

PRJNA528857 | ENA

Initiators for Continuous Activator Regeneration (ICAR) Depolymerization.

Not available

S-EPMC11673573 | biostudies-literature

ICAR-CIFT_Genome sequencing and assembly of bacterial isolates of aquaculture origin

PRJNA965951 | ENA

Transcriptional Regulation of icaADBC by both IcaR and TcaR in Staphylococcus epidermidis.

Not available

S-EPMC6398268 | biostudies-literature

icaR encodes a transcriptional repressor involved in environmental regulation of ica operon expression and biofilm formation in Staphylococcus epidermidis.

Not available

S-EPMC135245 | biostudies-literature

Repurposing cinacalcet suppresses multi-drug resistant Staphylococcus aureus by disruption of cell membrane and inhibits biofilm by targeting IcaR

Multi-drug resistant Staphylococcus aureus (S. aureus) infections continously threaten public health. The rapid escalation in morbidity and mortality rates associated with methicillin-resistant S. aureus (MRSA) infections necessitates the urgent development of novel antimicrobial agents. Our study r...

ORGANISM(S): Staphylococcus aureus

2024-02-07 | PXD041266 | Pride

Mutidrug-resistance s. aureus cinacalcet icar membrane

Base pairing interaction between 5'- and 3'-UTRs controls icaR mRNA translation in Staphylococcus aureus.

Not available

S-EPMC3868564 | biostudies-literature

Crystal structure of IcaR, a repressor of the TetR family implicated in biofilm formation in Staphylococcus epidermidis.

Not available

S-EPMC2275139 | biostudies-literature

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4670 Results

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