itraq proteomics

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Proteomics (1720)
Unknown (905)
Genomics (34)
Transcriptomics (24)
Multiomics (14)
Other (8)
Metabolomics (1)

Organisms

Homo sapiens (188)
Mus musculus (18)
Rattus norvegicus (17)
Rattus rattus (7)
Triticum aestivum (6)
Nicotiana tabacum (4)
Gallus gallus (3)
Oryza sativa (3)
Sus scrofa domesticus (3)
Streptomyces coelicolor (2)
Sus scrofa (2)
Drosophila melanogaster (2)
260674 (2)
Bos grunniens (2)
Bos taurus (2)
Candida albicans (2)
Cucumis sativus (2)
Lactuca sativa var. capitata (2)
Medicago sativa (2)
Natranaerobius thermophilus JW/NM-WN-LF (2)
Ophiocordyceps sinensis (2)
Paeonia suffruticosa (2)
Solanum tuberosum (2)
Agrobacterium tumefaciens (1)
Adonis amurensis (1)
Eulophia maculata (1)
Brassica rapa subsp. pekinensis (1)
Malus domestica (1)
Apis mellifera (1)
Anser canagicus (1)

Organisms

Homo sapiens (8)
Campylobacter jejuni subsp. jejuni (4)
Sus scrofa (2)
Rattus norvegicus (2)
Caprine alphaherpesvirus 1 (1)
Adonis amurensis (1)
Eulophia maculata (1)
Streptococcus pneumoniae D39 (1)
Apis mellifera carnica (1)
Streptomyces coelicolor (1)
Brassica rapa subsp. pekinensis (1)
Apis mellifera (1)
Drosophila melanogaster (1)
Mus musculus (1)

Repository

pride (1228)
iProX (236)
PeptideAtlas (117)
MassIVE (108)
ENA (34)
jPOST (28)
geo (16)
biostudies-arrayexpress (8)
GPMDB (8)
PAXDB (3)
MetaboLights (1)

Tissue

Cell culture (162)
Brain (117)
Plant cell (74)
Breast (72)
Leaf (72)
Epithelial cell (55)
Liver (53)
Root (46)
Whole body (41)
Lung (33)
Blood (30)
Blood serum (30)
Blood plasma (27)
Heart (22)
Blood cell (21)
Kidney (20)
T cell (19)
Fibroblast (17)
Macrophage (17)
Colon (15)
Permanent cell line cell (15)
Hepatocyte (14)
Primary cell (13)
Testis (13)
Cell suspension culture (12)
Plasma Non-glyco (10)
Others (8)
Female Reproductive System (6)
Large Intestine (4)
Ovary (3)

Disease

Breast Carcinoma (36)
Disease free (34)
Breast cancer (21)
Alzheimer's disease (18)
Cardiovascular system disease (12)
Wounds and Injuries (12)
Colon cancer (10)
Not Available (8)
Cervix carcinoma (7)
Melanoma (6)
Parkinson's disease (5)
Type 2 diabetes mellitus (5)
Colorectal Carcinoma (4)
Chronic lymphocytic leukemia (4)
Chronic myeloid leukemia (4)
Gonorrhea (4)
Lung adenocarcinoma (4)
Lung cancer (4)
Malignant neoplasm of ovary (4)
Mixed disorder as reaction to stress (4)
Myocardial ischemia (4)
Schizophrenia (4)
Stomach cancer (4)
Adult respiratory distress syndrome (3)
Brain cancer (3)
Chronic kidney disease (3)
Glioblastoma (3)
Hepatocellular carcinoma (3)
Serous Cystadenocarcinoma (2)
High Grade Ovarian Serous Adenocarcinoma (1)

Technology Type

Mass Spectrometry (1228)
Shotgun proteomics (970)
Bottom-up proteomics (98)
Top-down proteomics (58)
Affinity purification coupled with mass spectrometry proteomics (32)
Gel-based experiment (30)
Data-dependent acquisition (28)
SRM/MRM (16)
SWATH MS (14)
Chemical cross-linking coupled with mass spectrometry proteomics (13)
Mass spectrometry imaging (10)
All-ion fragmentation (7)
HDMSE (3)
MSE (2)
Proteogenomics (2)
Mass spectrometry (1)
Affinity proteomics (1)
DiaPASEF (1)
ITRAQ reagent (1)
Metaproteomics (1)
RNA mass spectrometry (1)

Instrument Platform

QExactive (83)
LTQ Orbitrap Velos (50)
Q Exactive (36)
LTQ Orbitrap Elite (10)
Instrument (8)
Q Exactive Plus (7)
TripleTOF 5600 (6)
LTQ Orbitrap (6)
Orbitrap Fusion Lumos (3)
MaXis (2)
TOF/TOF 5800 (2)
4800 Proteomics Analyzer (1)
LTQ Orbitrap Velos Pro (1)
LTQ Velos (1)
MS:1000490 (1)
MicrOTOF-Q II (1)
NanoACQUITY UPLC (1)
Orbitrap Exploris 480 (1)
Orbitrap Fusion (1)
Orbitrap Fusion ETD (1)
Q Exactive HF (1)
Q ExactiveTM Plus (1)
Q-Tof Premier (1)
QE-HF-X (1)
Sciex 5600+ TripleTOF (1)
TripleTOF 6600 (1)
Waters M Class NanoAcquity UPLC, Thermo Orbitrap Velos with ETD (1)
Quattro micro API (Waters) (1)
Agilent 5975E GC/MSD (Agilent) (1)
API 4000 QTRAP (AB Sciex) (1)

Publication Date

2022 (210)
2019 (195)
2020 (181)
2018 (174)
2021 (162)
2016 (145)
2015 (140)
2017 (108)
2023 (86)
2014 (74)
2025 (57)
2024 (43)
2013 (35)
2026 (14)
2011 (10)
2012 (5)
2010 (4)
2009 (4)
2006 (2)
2007 (1)

UNIPROT ID/AC

1433B_SOYBN (2)
1433D_SOYBN (2)
6DCS_SOYBN (2)
A1YZE0_SOYBN (2)
A5I866_SOYBN (2)
A5JUQ4_SOYBN (2)
A5JVZ7_SOYBN (2)
A5Z2K3_SOYBN (2)
A7BIC9_SOYBN (2)
A7X657_SOYBN (2)
A7XZJ7_SOYBN (2)
A9CPA7_SOYBN (2)
A9QNE4_SOYBN (2)
ACCD_SOYBN (2)
ACT3_SOYBN (2)
AKR1_SOYBN (2)
AMYB_SOYBN (2)
AOX3_SOYBN (2)
ATPB_SOYBN (2)
ATPE_SOYBN (2)
ATPF_SOYBN (2)
B0M195_SOYBN (2)
B0M196_SOYBN (2)
B0M1A0_SOYBN (2)
B0M1A4_SOYBN (2)
B0M1A6_SOYBN (2)
B0M1A9_SOYBN (2)
B0M1B1_SOYBN (2)
B1ACD3_SOYBN (2)
B1ACD5_SOYBN (2)

ENSEMBL ID

ENSG00000170477 (97)
ENSG00000229353 (93)
ENSG00000147251 (81)
ENSG00000204131 (80)
ENSG00000247315 (59)
ENSG00000176092 (33)
ENSMUSG00000098557 (2)
ENSMUSP00000141097 (2)
ENSMUSP00000141542 (2)

CHEBI ID

CHEBI:30037 (1)
CHEBI:136816 (1)
CHEBI:136809 (1)
CHEBI:136808 (1)
CHEBI:136804 (1)
CHEBI:136797 (1)
CHEBI:136802 (1)
CHEBI:136796 (1)
CHEBI:136794 (1)
CHEBI:80435 (1)
CHEBI:83006 (1)
CHEBI:136787 (1)
CHEBI:86338 (1)
CHEBI:136786 (1)
CHEBI:136780 (1)
CHEBI:136778 (1)
CHEBI:136775 (1)
CHEBI:136774 (1)
CHEBI:136771 (1)
CHEBI:136770 (1)
CHEBI:136768 (1)
CHEBI:136722 (1)
CHEBI:136814 (1)
CHEBI:136806 (1)
CHEBI:136790 (1)
CHEBI:136795 (1)
CHEBI:53166 (1)
CHEBI:90506 (1)
CHEBI:63843 (1)
CHEBI:136807 (1)

Metabolite Name

Alpha-Linolenate (1)
(9E)-Octadecenoic Acid (1)
Glycerol-3-Phosphate (1)
Eicosanoic Acid (1)
Hexadecanoic Acid (1)
Erythronic Acid (1)
Linoleate (1)
Threonate (1)
Cysteamine (1)
Beta-Sitosterol (1)
Stearic Acid (1)
Phytol (1)
Benzoate (1)
Ethanolamine (1)
Myo-inositol (1)
Malate (1)
Norvaline (1)
Leucine (1)
Lyxose (1)
Lactose (1)
Sorbose (1)
Galactose (1)
Aspartate (1)
Xylose (1)
Glycine (1)
Glycerol (1)
Valine (1)
Pyroglutamate (1)
Phosphate (1)
Cellobiose (1)

First Public Date

2014 (8)
2020 (6)
2015 (5)
2024 (4)
2025 (3)
2017 (2)
2013 (2)
2023 (1)
2022 (1)
2021 (1)
2019 (1)

Classification

bacteria (5)
viruses (1)

Modification

15.994915 (10)
Not available (7)
57.021464 (6)
-17.026549 (4)
45.987721 (4)
-18.010565 (3)
144.102062 (3)
144.105918 (3)
42.010565 (3)
4x(15)N labeled L-arginine (3)
79.966331 (2)
0.0 (1)
0.984016 (1)
144.105919 (1)
2x(15)N labeled L-lysine (1)
4 (1)
MTRAQ heavy (1)
Methionine (1)

Study type

Transcription profiling by array (6)
RNA-seq of coding RNA (2)

Release Date

2019 (100)
2015 (91)
2016 (84)
2020 (79)
2022 (75)
2018 (75)
2021 (74)
2017 (72)
2014 (56)
2013 (38)
2023 (32)
2012 (29)
2011 (21)
2010 (20)
2009 (20)
2025 (15)
2024 (15)
2008 (11)
2007 (3)
2006 (3)

Lab affiliation

University of Southampton (11)
College of Animal Sciences, Zhejiang University, Hangzhou, P. R. China (9)
University of Texas Medical Branch (6)
Division of Cardiovascular Sciences, School of Medical Science, Faculty of Biology, Medicine and Health, The University of Manchester (5)
He JunJun (5)
Philip Morris International R&D, Philip Morris Products S.A., Quai Jeanrenaud 5, 2000 Neuchâtel, Switzerland (5)
Federal University of Rio de Janeiro (4)
Institute of Animal Sciences, Chinese Academy of Agricultural Sciences (4)
Institute of Botany, Chinese Academy of Sciences (4)
Laboratory of Microbiology Oceanography, State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, State Key Laboratory of Ocean Engineering, Shanghai Jiao Tong University, School of Oceanography, Shanghai JiaoTong University (4)
Leibniz-Institut für Analytische Wissenschaften – ISAS – e.V. (4)
University of Oslo (4)
Vice Dean, Faculty of Medical and Human Sciences Section Lead, Infrastructure and Technology, Manchester Academic Health Science Centre University of Manchester Wolfson Molecular Imaging Centre Manchester M20 3LJ (4)
Aarhus University Hospital, Denmark (3)
Agricultural Biotechnology Research Center, Academia Sinica, Taiwan (3)
City University of Hong Kong (3)
College of Biology, Hunan University, China (3)
Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN 55905 (3)
Department of Molecular and Cellular Biology, Medical Institute of Bioregulation, Kyushu University (3)
Dept. of Oncology-Pathology, Karolinska Institutet, Stockholm, Sweden; Clinical proteomics mass spectrometry, Science for Life Laboratory, Sweden. (3)
ETH Zurich, Department of Biology, Institute of Molecular Health Sciences (3)
Hangzhou Normal University (3)
IBCH RAS (3)
Inserm, U1016, Institut Cochin, Paris, France Cnrs, UMR8104, Paris, France Plateforme Proteomique 3P5, Université Paris Descartes, Sorbonne Paris Cité, France. (3)
Key Laboratory of Functional Protein Research of Guangdong Higher Education Institutes, Institute of Life and Health Engineering, College of Life Science and Technology, Jinan University, Guangzhou 510632, China (3)
Philip Morris International R&D, Philip Morris Products S.A., Quai Jeanrenaud 5, 2000 Neuchatel, Switzerland (3)
Ruhr-Universität Bochum, Medizinisches Proteom-Center (3)
Tanz Centre for Research in Neurodegenerative Diseases, Faculty of Medicine, University of Toronto (3)
University of Florida (3)
University of Malaya (3)

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Heart-muscle expression ratios in pig obtained by 454-sequencing, iTRAQ-based proteomics and cDNA microarrays

The recent development within high-throughput technologies for expression profiling has allowed for parallel analysis of transcriptomes and proteomes in biological systems such as comparative analysis of transcript and protein levels of tissue regulated genes. Until now, such studies of have only in...

ORGANISM(S): Sus scrofa

2009-01-22 | E-GEOD-10122 | biostudies-arrayexpress

Defining, comparing, and improving iTRAQ quantification in mass spectrometry proteomics data.

Not available

S-EPMC3708183 | biostudies-literature

iTRAQ-Based and Label-Free Proteomics Approaches for Studies of Human Adenovirus Infections.

Not available

S-EPMC3608280 | biostudies-literature

iTRAQ proteomics of non fibrotic carcinoma on Human Liver

We present a study of hepatocellular carcinoma developed on non-fibrotic liver (nfHCC) that combines complementary quantitative iTRAQ-based proteomics and phosphoproteomics approaches. Using both approaches, we analyzed a set of 24 samples (18 nfHCC vs 6 non-tumor liver tissue).

ORGANISM(S): Homo sapiens (Human)

2014-09-18 | PXD001253 | Pride

iTRAQ-based HepaRG Membrane Proteomics

HepaRG cell, a stabilized bipotent liver progenitor cell line, exhibits hepatocyte functions only after differentiation. However, the mechanism of transition from non-differentiated to differentiated states, accompanied by proliferation and migration, is poorly understood. Little information exists ...

ORGANISM(S): Homo sapiens (Human)

2017-02-08 | PXD004752 | Pride

Heparg Membrane protein Itraq

Identification of Urinary Biomarkers for Exercise-Induced Immunosuppression by iTRAQ Proteomics.

Not available

S-EPMC7003279 | biostudies-literature

SILAC-iTRAQ-TAILS - Monitoring matrix metalloproteinase activity at the epidermal-dermal interface by SILAC-iTRAQ-TAILS

Secreted proteases act on interstitial tissue secretomes released from multiple cell types. Thus, substrate proteins might be part of higher molecular complexes constituted by many proteins with diverse and potentially unknown cellular origin. In cell culture these might be reconstituted by mixing n...

ORGANISM(S): Mus musculus (Mouse)

2015-05-11 | PXD001643 | Pride

Skin Basement membrane Tails Silac Itraq Mmp

Altered proteolytic events in experimental autoimmune encephalomyelitis discovered by iTRAQ shotgun proteomics analysis of spinal cord.

Not available

S-EPMC2716311 | biostudies-literature

Heart-muscle expression ratios in pig obtained by 454-sequencing, iTRAQ-based proteomics and cDNA microarrays

ORGANISM(S): Sus scrofa

2009-01-22 | GSE10122 | GEO

Optimizing a proteomics platform for urine biomarker discovery.

Not available

S-EPMC2957724 | biostudies-literature

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2692 Results

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