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MetabolomicsIdentification of AK4 and RHOC as novel oncogenes addicted by adult T-cell leukemia
Adult T-cell leukemia (ATL) is a highly aggressive T-cell malignancy characterized by human T-cell leukemia virus type 1 (HTLV-1) infection. ATL has a very poor prognosis and lacks satisfactory treatments; therefore, it is critical to identify novel targets in ATL cells in order to develop effective...
2025-02-03 | MTBLS11858 | MetaboLights
ProteomicsAeromonas hydrophila whole cell differential proteins
Differential protein of Aeromonas hydrophila(putative human infections)'s whole cell protein
ORGANISM(S): Aeromonas sp. enrichment culture clone AM2 Escherichia coli 
2022-01-13 | PXD029702 | Pride
Differential protein  aeromonas hydrophila  whole cell protein  putative human infections  logarithmic period cell 
TranscriptomicsTranscription profiling of wild type, lasR rhIR and rpoS Pseudomonas aeruginosa mutants treated with acyl-HSL to investigage quorum sensing during the logarithmic phase of growth
Effect of acyl-HSL signal or ectopic lasR, rhlR, or rpoS expression on the advancement of quorum sensing gene expression during the logarithmic phase of growth
ORGANISM(S): Pseudomonas aeruginosa 
2007-08-10 | E-MEXP-1183 | biostudies-arrayexpress
MetabolomicsPhenotypes and Multi—omics Reveal Changes and Molecular Mechanism of Suspension Adaptation of HEK293 Cells Structural Remodelling, Metabolic Reconstruction and Stress Resistance

Human embryonic kidney 293 (HEK293) cells have been successfully adapted from adherent to suspension culture and have been widely applied in both scientific research and the pharmaceutical industry. However, the alterations in cells during the adaptation have not been well described, which raise ...

2025-12-16 | MTBLS13517 | MetaboLights
MetabolomicsTime-resolved decoding of metabolic signatures of in vitro growth of the hemibiotrophic pathogen Colletotrichum sublineolum
Metabolomics has emerged as a powerful approach to comprehensively interrogate cellular biochemistry. As such, we applied an untargeted liquid chromatography-mass spectrometry metabolomic strategy to elucidate metabolome changes in the anthracnose-causing hemibiotrophic sorghum pathogen, Colletotric...
2022-05-30 | MTBLS735 | MetaboLights
TranscriptomicsKolsto-B. cereus Comparison of WT and BC4707 mutant during growth in logarithmic phase
Comparison of B. cereus ATCC14579 wild type and its isogenic BC4707 mutant under growth in logarithmic phase
ORGANISM(S): Bacillus cereus 
2012-01-31 | E-MEXP-3537 | biostudies-arrayexpress
TranscriptomicsExon arrays of ENCODE tier 1, tier 2 and tier 3 cell types
At cell harvest, a subset of cells was stored at -20oC in RNALater. Total RNA from 5 X 106 cells were purified using Ribopure (Ambion) according to vendor recommended protocols. Total RNA quality was assessed on RNA 6000 Nano Chips (Agilent) using a Bioanalyzer (Agilent). Approximately 3ug of tot...
ORGANISM(S): Homo sapiens 
2009-11-19 | E-GEOD-19090 | biostudies-arrayexpress
ProteomicsProteomic profile of nucleoid-associated proteins isolated from Mycoplasma gallisepticum in different growth phases
Mycoplasma gallisepticum (MG) is one of the smallest free-living and self-replicating organisms, it is characterized by lack of cell wall and reduced genome size. As a result of genome reduction, MG has a limited variety of DNA-binding proteins (DBP) and transcription factors. To investigate the dyn...
ORGANISM(S): Mycoplasma gallisepticum S6 
2020-05-12 | PXD019077 | Pride
Mycoplasma gallisepticum Synchronous growth Dia Nucleoid Nucleoid associated proteins 
TranscriptomicsTranscription profiling of Acidithiobacillus ferrooxidans type strain ATCC23270 grown in the presence of iron or elemental sulfur as energy source until mid logarithmic phase
Transcriptional profiles from Acidithiobacillus ferrooxidans type strain ATCC23270 grown in the presence of iron or elemental sulfur as energy source until mid logarithmic phase were compared. Cells were harvested after 48 hs of growth in 9K-FeII pH 1.6 and after 120 hs of growth in 9K-S0 pH 3.5. Pe...
ORGANISM(S): Acidithiobacillus ferrooxidans 
2009-12-31 | E-MEXP-1990 | biostudies-arrayexpress
TranscriptomicsGene expression profile of the neonatal female mouse brain after administration of testosterone propionate.
The aim of this study is to investigate the gene expression profiles during masculinization of neonatal female mice brain by exogenous androgen treatment. The results of our expression analysis will shed light on the identification of the key molecules of sexual differentiation of mammalian brain. E...
ORGANISM(S): Mus musculus 
2015-07-31 | E-GEOD-59375 | biostudies-arrayexpress
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