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MetabolomicsConsistency across multi-omics layers in a drug-perturbed gut microbial community
Multi-omics analyses are increasingly employed in microbiome studies to obtain a holistic view of molecular changes occurring within microbial communities exposed to different conditions. However, it is not always clear to what extent each omics data type contributes to our understanding of the comm...
2022-12-08 | MTBLS3129 | MetaboLights
GenomicsMock community
Mock community
PRJEB42498 | ENA
GenomicsMock Community Sample
Mock Community Sample
PRJEB12850 | ENA
GenomicsViral mock community
Viral Mock Community
PRJNA431646 | ENA
GenomicsGut mock community
Gut mock community Raw sequence reads
PRJNA725207 | ENA
GenomicsMock Community
Mock community sequencing
PRJEB6244 | ENA
Genomicsfungal mock community
fungal mock community under GO
PRJNA623504 | ENA
GenomicsGated mock community
Gated Mock community using cell sorter
PRJEB73485 | ENA
ProteomicsQuantification of mock microbial communities with metagenomes, 16S rRNA gene amplicons and metaproteomics
In this study we developed metaproteomics based methods for quantifying taxonomic composition of microbiomes (microbial communities). We also compared metaproteomics based quantification to other quantification methods, namely metagenomics and 16S rRNA gene amplicon sequencing. The metagenomic and 1...
ORGANISM(S): Eukaryota (eucaryotes) Bacteria Archaea Viruses 
2017-05-12 | PXD006118 | Pride
1d-lc Metaproteome Microbiome Metagenomics 2d-lc Mock community Biomass assessment Metaproteomics 
Genomicsfungal mock community
Fungal mock community (even and staggered)
PRJNA482750 | ENA
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