Sort   by:  
 Page size 
TranscriptomicsRNA-seq of different tissues from wild-type and C/EBPα ΔuORF mutant African turquoise killifish Nothobranchius furzeri
The transcription factor CCAAT/enhancer binding protein alpha (C/EBPα) regulates cell differentiation, proliferation, and function in various tissues, including the liver, adipose tissue, skin, lung, and hematopoietic system. Studies in rats, mice, humans, and chickens have shown that CEBPA mRNA und...
ORGANISM(S): Nothobranchius furzeri 
2026-05-26 | E-MTAB-15325 | biostudies-arrayexpress
ProteomicsComputational prediction combined with proteogenomics unveils widespread non-AUG translation initiation events in plants
Non-AUG translation initiation is crucial for regulating translation, which can generate N-terminally extended protein isoforms with diverse biological functions. However, a comprehensive view of non-AUG translation initiation events with N-terminal extensions (NTEs) across monocots and dicots remai...
ORGANISM(S): Glycine max Zea mays (Maize) Oryza sativa (Rice) 
2026-04-27 | PXD058528 | Pride
Non-aug translation initiation  n-terminally extended protein isoforms  n-terminal extensions (ntes)  upstream translation initiation sites (utiss)  proteogenomics  monocots and dicots 
TranscriptomicsTranslation initiation site profiling reveals widespread synthesis of non-AUG-initiated protein isoforms in yeast
Genomic analyses in budding yeast have helped to define the foundational principles of eukaryotic gene expression, but have systematically excluded specific classes of potential coding regions, including those with non-AUG start codons. Without methods to define coding regions empirically, the preva...
ORGANISM(S): Saccharomyces cerevisiae 
2020-07-24 | GSE150375 | GEO
GenomicsTranslation initiation site profiling reveals widespread synthesis of non-AUG-initiated protein isoforms in yeast
Translation initiation site profiling reveals widespread synthesis of non-AUG-initiated protein isoforms in yeast
PRJNA631930 | ENA
UnknownTranslation Initiation Site Profiling Reveals Widespread Synthesis of Non-AUG-Initiated Protein Isoforms in Yeast.
Not available
S-EPMC7508262 | biostudies-literature
UnknownTwo isoforms of the mRNA binding protein IGF2BP2 are generated by alternative translational initiation.
Not available
S-EPMC3299737 | biostudies-literature
ProteomicsN-terminal COFRADIC on cytosolic proteins of HEK293T cells - UniProt search
N-terminal proteoforms stem from the same gene but differ at their N-terminus, and most of these are found to be truncated, though some are N-terminally extended caused by ribosomes starting translation from codons in the annotated 5’UTR, and/or carry modified N-termini different from those of the c...
ORGANISM(S): Homo sapiens (Human) 
2023-06-08 | PXD039392 | Pride
Cytosol Hek293t cells N-terminal peptides 3 proteases Cofradic Atis Lc-ms/ms 
GenomicsAlternate isoforms of IRF7 Differentially Regulate Interferon Expression
Alternate isoforms of IRF7 Differentially Regulate Interferon Expression
PRJNA1203213 | ENA
TranscriptomicsAlternate isoforms of IRF7 Differentially Regulate Interferon Expression
Interferon Regulatory Factor 7 (IRF7), and its homologue IRF3, are master transcriptional regulators of the innate immune response. IRF7 binds to promoters of interferon beta (IFNb) and several IFNas, as a homodimer or as a heterodimer with IRF3 to drive expression of these type I IFNs, which in tur...
ORGANISM(S): Homo sapiens 
2025-07-17 | GSE285352 | GEO
UnknownCharacterization of novel elongated Parvulin isoforms that are ubiquitously expressed in human tissues and originate from alternative transcription initiation.
Not available
S-EPMC1420321 | biostudies-literature
Sort   by:  
 Page size