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ProteomicsDictyostelium DIA LFQ proteomics of vegetative and developmental growth
Dictyostelium discoideum behavior depends on nutrients. When sufficient food is present these amoebae exist in a unicellular state (vegetative growth), but upon starvation they aggregate into a multicellular organism (developmental growth). For proteomics 30 minutes and eight hour cultures of D. dis...
ORGANISM(S): Dictyostelium discoideum (Slime mold) 
2021-03-23 | PXD023404 | Pride
Dictyostelium discoideum  non-starved (vegetative)  starved (developmental)  dia hyper reaction monitoring  spectronaut  sulfur metabolism  reactive oxygen species 
UnknownDevelopmentally Programmed Switches in DNA Replication: Gene Amplification and Genome-Wide Endoreplication in Tetrahymena.
Not available
S-EPMC9967165 | biostudies-literature
TranscriptomicsOxidative stress management in Dinoroseobacter shibae: Role of extrachromosomal elements and the importance of a small chromid during starvation
Aerobic anoxygenic phototrophic bacteria (AAPs) of the Roseobacter group are abundant in the photic zone of the marine environment. Dinoroseobacter shibae, a typical representative, converts light into additional energy that enhances its survival under nutrient-depletion. AAPs produce cytotoxic sing...
ORGANISM(S): Dinoroseobacter shibae DFL 12 = DSM 16493 
2015-01-01 | E-GEOD-62869 | biostudies-arrayexpress
TranscriptomicsChronological Aging of Yeast in the Absence of Caloric Restriction: Cell Immobilization Uncouples Reproduction from Metabolism
Studies using yeast have advanced our understanding of both replicative and chronological aging, leading to the discovery of longevity genes that have homologues in higher eukaryotes. Chronological lifespan in yeast is conventionally defined as the lifespan of a non-dividing cell. To date, this para...
ORGANISM(S): Saccharomyces cerevisiae 
2011-03-31 | E-GEOD-21187 | biostudies-arrayexpress
TranscriptomicsTranscriptional Response to Sulfur Limitation in Pelagibacter ubique
Candidatus Pelagibacter ubique is the most abundant marine microorganism, but is unable to utilize inorganic sulfur compounds that are plentiful in the ocean. To investigate how these cells adapt to organic sulfur limitation, batch cultures were grown in defined media containing either limiting or n...
ORGANISM(S): Candidatus Pelagibacter ubique HTCC1062 
2016-06-26 | E-GEOD-31630 | biostudies-arrayexpress
TranscriptomicsGlobal Functional Targets of the Histone Methyltransferase SDG8 Uncover a Role for Histone Modification in Energy Metabolism
Histone methylation modulates gene expression in response to external and internal cues. We uncovered a non-redundant role for the Arabidopsis histone methyltransferase, SDG8, which provides a unique opportunity to study the global function of a specific histone methyltransferase within in a multice...
ORGANISM(S): Arabidopsis thaliana 
2015-03-01 | E-GEOD-62435 | biostudies-arrayexpress
MetabolomicsTranscriptional Shift and Metabolic Adaptations during Leishmania Quiescence Using Stationary Phase and Drug Pressure as Models

Microorganisms can adopt a quiescent physiological condition which acts as a survival strategy under unfavourable conditions. Quiescent cells are characterized by slow or non-proliferation and deep down-regulation of processes related to biosynthesis. Although quiescence has been described mostly...

2022-02-23 | MTBLS4046 | MetaboLights
GenomicsTranscriptome analysis of the binucleate ciliate Tetrahymena thermophila cells after mating and re-feeding.
Transcriptome analysis of the binucleate ciliate Tetrahymena thermophila cells after mating and re-feeding.
PRJNA863655 | ENA
TranscriptomicsWhole-Genome Transcriptional analysis of Sulfate and Sulfonate assimilation by Bradyrhizobium japonicum USDA 110
The ability of Bradyrhizobium japonicum and B. elkanii strains to utilize alkane and aromatic sulfonates as sole sources of sulfur for growth was investigated. All of the strains tested were able to utilize alkane sulfonates, but not aromatic sulfonates for growth. Whole-genome transcriptional profi...
ORGANISM(S): Bradyrhizobium japonicum 
2010-06-19 | E-GEOD-19039 | biostudies-arrayexpress
GenomicsTranscriptional_profiling_of_Chlamydomonas_reinhardtii
Transcriptional_profiling_of_Chlamydomonas_reinhardtii
PRJEB1053 | ENA
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