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ProteomicsEvaluation of a bead-free immunoprecipitation technique coupled with tandem mass spectrometry for identification of plant-virus protein interactions (DeBlasio_JBT_2017)
Potato leafroll virus (PLRV) is an aphid-borne, RNA virus in the Luteoviridae that causes significant loss to potato production worldwide. Precision methods to block virus infection in plants or the transmission of a virus by the insect represent new approaches to virus disease management and requir...
ORGANISM(S): Nicotiana benthamiana 
2018-10-24 | PXD006338 | Pride
Host-pathogen interactions Bead-free immunoprecipitation  plant-virus interactome  tandem mass spectrometry Luteoviridae Polerovirus Molecular virology Potato leafroll virus Phloem-limited 
ProteomicsTurboID-based proximity labeling identifies reticulon-like protein B2 as a pro-viral factor coopted for the biogenesis of viral replication organelles in plants
Although intensive studies have been performed to identify and characterize host factors involved in viral replication complex formation, the high dynamism of this process and the insoluble properties of the complex make it difficult to be analyzed comprehensively using traditional affinity purifica...
ORGANISM(S): Nicotiana Benthamiana 
2023-02-12 | PXD040073 |
UnknownA plant virus protein, NIa-pro, interacts with Indole-3-acetic acid-amido synthetase, whose levels positively correlate with disease severity.
Not available
S-EPMC10519798 | biostudies-literature
UnknownDiscovery and targeted LC-MS/MS of purified polerovirus reveals differences in the virus-host interactome associated with altered aphid transmission.
Not available
S-EPMC3484124 | biostudies-literature
UnknownMolecular signatures of silencing suppression degeneracy from a complex RNA virus.
Not available
S-EPMC8270454 | biostudies-literature
UnknownChilli leaf curl virus infection downregulates the expression of the genes encoding chloroplast proteins and stress-related proteins.
Not available
S-EPMC6745583 | biostudies-literature
TranscriptomicsTranscriptional perturbations caused by tumor virus proteins
Genotypic differences greatly influence susceptibility and resistance to disease. Understanding genotype-phenotype relationships requires that phenotypes be viewed as manifestations of network properties, rather than simply as the result of individual genomic variations. Genome sequencing efforts ha...
ORGANISM(S): Homo sapiens 
2012-07-19 | E-GEOD-38467 | biostudies-arrayexpress
UnknownRETICULON-LIKE PROTEIN B2 is a proviral factor co-opted for the biogenesis of viral replication organelles in plants.
Not available
S-EPMC10396372 | biostudies-literature
UnknownIdentification of protein interactions of grapevine fanleaf virus RNA-dependent RNA polymerase during infection of Nicotiana benthamiana by affinity purification and tandem mass spectrometry.
Not available
S-EPMC8295916 | biostudies-literature
UnknownThe effects of potato virus Y-derived virus small interfering RNAs of three biologically distinct strains on potato (Solanum tuberosum) transcriptome.
Not available
S-EPMC5513076 | biostudies-literature
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