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TranscriptomicsSpheres culture from lung adenocarcinoma pleural effusions
Briefly, we analyzed gene expression profiles in adherent cultures compared to sphere cultures from malignant pleural effusions (MPEs). MPEs could represent an opportunity to culture a wide variety of cancer cells from different donors. In this study, we set up culture conditions for cancer cells de...
ORGANISM(S): Homo sapiens 
2011-12-02 | E-MEXP-3025 | biostudies-arrayexpress
TranscriptomicsReal-time quantitative PCR analysis of human malignant pleural mesothelioma tissue specimens
BACKGROUND: Malignant pleural mesothelioma (MPM) is difficult to distinguish from reactive mesothelial proliferations (RMPs). MicroRNAs (miRNAs) are small non-coding RNA-strands (~22 nucleotides) that post-transcriptionally regulate gene-expression. Studies have shown that miRNAs are potential diagn...
ORGANISM(S): Homo sapiens 
2014-01-25 | E-GEOD-54394 | biostudies-arrayexpress
ProteomicsMalignant pleural mesothelioma targeted proteomics signature from blood
Targeted proteomics based blood biomarkers for malignant pleural mesothelioma cancer
ORGANISM(S): Homo Sapiens 
2020-08-03 | PXD018457 | panorama
TranscriptomicsTranscription profiling of human pleural mesothelioma versus parietal and visceral pleura
Genome-wide profile of pleural mesothelioma versus parietal and visceral pleura
ORGANISM(S): Homo sapiens 
2009-01-01 | E-MTAB-47 | biostudies-arrayexpress
TranscriptomicsmRNA profiling by array of malignant pleural mesothelioma
A Cartes d'Identite des Tumeurs (CIT) project from the french Ligue Nationale Contre le Cancer (http://cit.ligue-cancer.net: mRNA profiles were obtained using HumanGeneChip HG-U133 Plus 2.0 arrays (Affymetrix) for the 67 samples from the study (63 MPM tumors and 4 normal pleural samples). We used th...
ORGANISM(S): Homo sapiens 
2019-05-23 | E-MTAB-6877 | biostudies-arrayexpress
ProteomicsMapping the soluble human leukocyte antigen peptidome of pleural effusions reveals lung and tumor-associated antigens
Soluble HLA (sHLA) molecules released to the plasma, carry their original peptide cargo and provide insight into the protein synthesis and degradation schemes of their source cells and tissues. Other body fluids, such as pleural effusions, may also contain sHLA-peptide complexes, and can potentially...
ORGANISM(S): Homo sapiens (Human) 
2022-05-25 | PXD027766 | Pride
Tumor antigens Immunopeptisome Pleural effusion Cancer/testis antigens Hla peptidome Lung cancer Lc-ms/ms 
TranscriptomicsTranscription profiling of human malignant pleural mesothelioma tumors and cell lines
Malignant pleural mesothelioma (MPM) is a highly lethal, poorly understood neoplasm that is typically associated with asbestos exposure. We performed transcriptional profiling using high-density oligonucleotide microarrays containing approximately 22,000 genes to elucidate potential molecular and pa...
ORGANISM(S): Homo sapiens 
2007-08-25 | E-GEOD-2549 | biostudies-arrayexpress
TranscriptomicsGene Expression of Malignant Pleural Mesothelioma Tumor and paired Normal Lung tissue
In order to discover critical pathways /networks or therapeutic targets in pleural mesothelioma we profiled 55 tumors along with paired normal tissue (for 41 tumors) using Affymetrix U133 plus 2.0 chips RNA isolated from frozen resected tumor and normal tissues was hybridized to Affymetrix U133 plus...
ORGANISM(S): Homo sapiens 
2014-08-31 | E-GEOD-51024 | biostudies-arrayexpress
TranscriptomicsHuman fetal chylothorax: pleural fluid vs. ascites fluid
Transcriptional profile comparison of the pleural and ascites fluids in hydropic fetuses affected with chylothorax. Two-condition experiment, pleural fluid vs. ascites fluid. Comparison of the transcriptional profile between sample collected before and after OK-432 treatment and between fetuses with...
ORGANISM(S): Homo sapiens 
2012-12-31 | E-GEOD-33872 | biostudies-arrayexpress
GenomicsPleural cryptococcosis diagnosed by pleural biopsy in a thymoma patient: a case report
Pleural cryptococcosis diagnosed by pleural biopsy
PRJEB64498 | ENA
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