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MetabolomicsSponge exudates influence coral reef picoplankton dynamics
Coral reef sponges efficiently take up particulate and dissolved organic matter (DOM) from the water column and release compounds such as nucleosides, amino acids, and other dissolved metabolites to the surrounding reef via their exhalent seawater, but the influence of this process on reef picoplank...
2026-01-12 | MTBLS5747 | MetaboLights
MetabolomicsSelective profiling of translationally active tRNAs and their dynamics under stress

During translation, transfer RNAs (tRNAs) deliver specific amino acids to the ribosome in a coordinated manner with the sequence encoded by the mRNA. Despite their central role in protein synthesis, the precise contribution of tRNAs to the modulation of translation remains poorly understood, prim...

2026-06-25 | MTBLS12806 | MetaboLights
MetabolomicsRNA modification dynamics during Enterococcus faecalis OG1RF growth
Quantitative analysis of relative levels of RNA modifications in small (primarily tRNA) and large (primarily 16S/23S rRNA) RNAs isolated from Enterococcus faecalis OG1RF across a growth time course in BHI media.
2026-08-20 | MTBLS14602 | MetaboLights
ProteomicsSimultaneous characterisation of RNA and protein subcellular dynamics
Existing methods to analyse RNA localisation are constrained to specific RNAs or subcellular niches, precluding the cell-wide mapping of RNA. We present Localisation of RNA (LoRNA), which maps, at once, RNAs to membranous (nucleus, ER and mitochondria) and membraneless compartments (cytosol, nucleol...
ORGANISM(S): Homo sapiens (Human) 
2022-01-25 | PXD030456 | Pride
Dynamics Subcellular localisation Tmt Spatial-proteome Lopit 
GenomicsInterrogation of RNA-protein interaction dynamics in bacterial growth
Interrogation of RNA-protein interaction dynamics in bacterial growth
PRJNA986861 | ENA
GenomicsSignal-noise metrics for RNA binding protein identification reveal broad spectrum protein-RNA interaction frequencies and dynamics
Signal-noise metrics for RNA binding protein identification reveal broad spectrum protein-RNA interaction frequencies and dynamics
PRJNA986834 | ENA
GenomicsThe RNA binding protein LIN28A mediates chromatin dynamics during neuronal differentiation
The RNA binding protein LIN28A mediates chromatin dynamics during neuronal differentiation
PRJNA1312830 | ENA
TranscriptomicsCoordinated posttranscriptional mRNA population dynamics during T-cell activation
Although RNA-binding proteins (RBPs) coordinate many key decisions during cell growth and differentiation, the dynamics of RNA–RBP interactions have not been extensively studied on a global basis. We immunoprecipitated endogenous ribonucleoprotein complexes containing HuR and PABP throughout a T-cel...
ORGANISM(S): Homo sapiens 
2009-08-19 | E-GEOD-11989 | biostudies-arrayexpress
TranscriptomicsDynamic profiling of the protein life cycle in response to pathogens (RNA-seq)
Protein expression is regulated by production and degradation of mRNAs and proteins, but their specific relationships remain unknown. We combine measurements of protein production and degradation and mRNA dynamics to build a quantitative genomic model of the differential regulation of gene expressio...
ORGANISM(S): Mus musculus 
2015-03-06 | E-GEOD-59784 | biostudies-arrayexpress
GenomicsRNA G-quadruplex dynamics steers the crosstalk between protein synthesis and energy metabolism
RNA G-quadruplex dynamics steers the crosstalk between protein synthesis and energy metabolism
PRJNA1000471 | ENA
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